CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STAA2 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain JH1) GN=clpP PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46
Identity = 91/179 (50.84%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  ++   RI+S  TG+S E++QKD DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STAA1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=clpP PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46
Identity = 91/179 (50.84%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  ++   RI+S  TG+S E++QKD DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46
Identity = 88/171 (51.46%), Postives = 126/171 (73.68%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RIVFLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A +AIYD +Q ++ DVST+ +GM+AS  + +L  G KGKRFA+PN+ +MIHQP+GGA GQ  ++EI A+ I+  +D   RI+S  TG+  E +++D DRD +M+  +A+EY
Sbjct:   13 RGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_NATTJ (ATP-dependent Clp protease proteolytic subunit OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=clpP PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.828e-46
Identity = 83/165 (50.30%), Postives = 123/165 (74.55%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RI+F+G  I+D +A+++I+Q+L L+++DP KDI L++NSPGG + A +AIYD +Q +R+DVST+ +GM+AS  +++L  G +GKRF +PN+R+M+HQPMGGA GQ  DVEI AREIM  K+   +I++  TG+  EQ+ KD DRD +MS  EA +Y
Sbjct:   19 DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STAES (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.022e-45
Identity = 90/179 (50.28%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  ++   RI+S  TG+S E++Q+D DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STAEQ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpP PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.022e-45
Identity = 90/179 (50.28%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  ++   RI+S  TG+S E++Q+D DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.022e-45
Identity = 98/209 (46.89%), Postives = 136/209 (65.07%), Query Frame = 3
Query:  210 HDVPLSSAPQTPATAM----------------RGAEA-DAMGLLPRERIVFLGNN------IDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +D PLS+  ++PA  +                RG  A D    L RERI+FLG        IDD VAD+I++QLL LDA+DP KDI L++NSPGGS++A MAIYD ++ +R DV T+  G++AS  + +L GGT GKR A+PN R+MIHQP+GGA GQ +D+EIQAREI+++K     ++S  TG+  E+++ D +RD +MS  EA  Y
Sbjct:    6 YDHPLSAILRSPALNLPPTHANIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAY 214          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.335e-45
Identity = 85/179 (47.49%), Postives = 129/179 (72.07%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P     + RG  A D    L R+RI+FLG  +DD +A+ I++Q+L L+++DP KDI L++NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS  + +L GGTKGKR A+P+ R+MIHQP+GGA G   D+EIQA+EI+  K++   +++  TG+  E++++D DRD +M+P +A EY
Sbjct:    3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEY 181          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP3_ANAVT (ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.744e-45
Identity = 86/165 (52.12%), Postives = 121/165 (73.33%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L RERI+FLG  IDD VA+ I++QLL LDA+D  KDI+L++NSPGGS+ A MAIYD +Q +R DV T+  G++AS  + +L  GTKGKR ++P++R+MIHQP+GGA GQ +D+EIQAREI++ K    ++++  TG+  E+++ D DRD +MS  EA  Y
Sbjct:   27 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNY 191          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_ANASP (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.744e-45
Identity = 86/165 (52.12%), Postives = 121/165 (73.33%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L RERI+FLG  IDD VA+ I++QLL LDA+D  KDI+L++NSPGGS+ A MAIYD +Q +R DV T+  G++AS  + +L  GTKGKR ++P++R+MIHQP+GGA GQ +D+EIQAREI++ K    ++++  TG+  E+++ D DRD +MS  EA  Y
Sbjct:   45 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNY 209          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_STAA25.994e-4650.84ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA15.994e-4650.84ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GEOKA5.994e-4651.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NATTJ7.828e-4650.30ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAES1.022e-4550.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAEQ1.022e-4550.28ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_THEEB1.022e-4546.89ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP2_SYNJB1.335e-4547.49ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANAVT1.744e-4552.12ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_ANASP1.744e-4552.12ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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