CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_GEOTN (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.975e-45
Identity = 87/171 (50.88%), Postives = 125/171 (73.10%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+FLG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A +AIYD +Q ++ DVST+ +GM+AS  + +L  G KGKRFA+PN+ VMIHQP+GGA GQ  ++EI A+ I+  +D   RI++  TG+  E +++D DRD +M+  +A EY
Sbjct:   13 RGERAYDIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_ALHEH (ATP-dependent Clp protease proteolytic subunit OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.885e-45
Identity = 85/179 (47.49%), Postives = 127/179 (70.95%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P     + RG  A D    L +ER++FL   ++D +A+ I++QLL L++++P KDI +++NSPGG+++A +AIYD +Q ++ DVSTV +G +AS  +L+L GGTKGKR+A+PN+R+MIHQP+GG  GQ  DV+I AREI+  +D   RI++  TG+  E + +D DRD +MSP  A EY
Sbjct:   20 PMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHIYINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYALPNSRMMIHQPLGGFQGQATDVDIHAREILDMRDRLNRIMAHHTGQDMETIARDTDRDNFMSPDTACEY 198          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_THELT (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=clpP PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45
Identity = 84/165 (50.91%), Postives = 125/165 (75.76%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RIVFLG  IDD VA+ +++QLL L+A+DP KDI+L++NSPGGS++A +AIYD +Q +++DV T+ +G +AS A+++L  GTKGKRFA+PN R+M+HQP+GGA G V DVEI  +E++  K+    I+S  TG+  ++++KD DRD +MS  EA++Y
Sbjct:   23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDY 187          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STAHJ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpP PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45
Identity = 89/179 (49.72%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    T  RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L AQD  KDI L++NSPGGS++A  AIYD +Q ++ DV T+ +GM+AS  S +L  G KGKRFA+PN  VMIHQP+GGA GQ  ++EI A  I+  ++   +I++  TG+S E++QKD DRD +++  EA EY
Sbjct:    5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45
Identity = 84/179 (46.93%), Postives = 128/179 (71.51%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P     + RG  A D    L R+RI+FLG  +DD +A+ I++Q+L L+++DP KDI L++NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS  + +L GG KGKR A+P+ R+MIHQP+GGA G   D+EIQA+EI+  K++   +++  TG+  E++++D DRD +M+P +A EY
Sbjct:    3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEY 181          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.627e-45
Identity = 86/171 (50.29%), Postives = 123/171 (71.93%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L A+DP KDI L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS  + +L  G KGKRFA+PN+ +MIHQP+GG  GQ  ++EI A+ I+  +D   RI+S  TG+  E +++D DRD +M+  +A EY
Sbjct:   13 RGERAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.627e-45
Identity = 84/165 (50.91%), Postives = 124/165 (75.15%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L  +RI+FLG  +DD +A+AII+ +L LD++DP KDI L++NSPGGS+SA +AIYD +Q VRADV+T+ +G++AS  S +L  G KGKR ++P++R+MIHQP+GGA GQ  D+ IQA+EI++ KD   +I+S  TG+  E++++D DRD +MS  +A +Y
Sbjct:   21 DIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQY 185          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 90/185 (48.65%), Postives = 129/185 (69.73%), Query Frame = 3
Query:  219 PLSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQP-MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P    P     + RG  A D    L ++RI+FLG  +DD VA+AI++QLL L+++DP +DI L++NSPGGS+SA +AIYD +Q V+ D+ T ALGM+AS  + +L  GTKGKRFA+PNTR+++HQP +GG +GQ  DVEI ARE++  K     I+S  TG+ ++++++D DRD  M   EA+EY
Sbjct:    6 PQGVIPYVIEQSPRGERAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEY 190          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_LISMO (ATP-dependent Clp protease proteolytic subunit OS=Listeria monocytogenes GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD +  V+ADV T+ +GM+AS  S +L  G  GKRFA+PN  +MIHQP+GGA GQ  ++EI AR I+  K+    I++  TG+ +E + +D DRD +M+  EA +Y
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_LISMF (ATP-dependent Clp protease proteolytic subunit OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpP PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.655e-45
Identity = 89/171 (52.05%), Postives = 121/171 (70.76%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL LDAQDP KDI L++NSPGGS+SA MAIYD +  V+ADV T+ +GM+AS  S +L  G  GKRFA+PN  +MIHQP+GGA GQ  ++EI AR I+  K+    I++  TG+ +E + +D DRD +M+  EA +Y
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDY 183          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_GEOTN2.975e-4550.88ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ALHEH3.885e-4547.49ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THELT5.074e-4550.91ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAHJ5.074e-4549.72ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_SYNJA5.074e-4546.93ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_ANOFW6.627e-4550.29ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_GLOVI6.627e-4550.91ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_RUBXD8.655e-4548.65ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LISMO8.655e-4552.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LISMF8.655e-4552.05ATP-dependent Clp protease proteolytic subunit OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
back to top