CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_TROW8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Tropheryma whipplei (strain TW08/27) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.894e-37
Identity = 75/160 (46.88%), Postives = 113/160 (70.62%), Query Frame = 3
Query:  288 LPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L +ERIV+LG  IDD +A+ I +++LLL+A DP +DI L++NSPGGS++A MAIYD +Q V  D+ TV +GM+AS   ++L  GT+ KR+ MPN RV++HQP+ G  G   D++ QA+ I+  K   ++I +  TG++ EQ+ +D DRD + +  EA+EY
Sbjct:   12 LLQERIVWLGEAIDDKLANEICAKILLLNADDPKEDIFLYINSPGGSITAGMAIYDTMQFVSNDIVTVGIGMAASMGQVLLTSGTQNKRYIMPNARVLLHQPLAGFGGTASDIQTQAKLILDMKYRLSQITASRTGKTVEQIMEDGDRDHWFTAEEALEY 171          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_CAEEL (ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Caenorhabditis elegans GN=clpp-1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.086e-37
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L R+RIV L   +DDF+A A+I+QLL L ++   K I +++NSPGGS++A +AIYD +Q++ A VST  +G ++S  SL+L  G KG R A+PN+R+M+HQP GGA G   D+ I+A EI   K     I    TG S+++++K +DRDR+MS  EA+++
Sbjct:   41 DIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKF 205          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_SALRD (ATP-dependent Clp protease proteolytic subunit 2 OS=Salinibacter ruber (strain DSM 13855) GN=clpP2 PE=3 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.086e-37
Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 3
Query:  213 DVPLSS-APQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D P+S   P       RG  A D    L +ERIVF+G  I+D +A+  ++QLL L ++   K I L++NSPGG + + + +YD +Q + A VST+ +G++AS  S++L  G    R  +PN+RVMIHQPMGGA GQ  D+EIQA EIM  K+    I++  TG+  +Q++ D DR+ +MS  EA EY
Sbjct:   15 DQPMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEKPINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLPNSRVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMSAEEAEEY 201          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_LEIXX (ATP-dependent Clp protease proteolytic subunit 1 OS=Leifsonia xyli subsp. xyli GN=clpP1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.086e-37
Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 3
Query:  261 GAEADAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            G +      L ++RI++LG+ + D  A+ I ++LLLL A+D  +DI L++NSPGGS++A MAIYD +Q V  D+ TV +GM+AS   L+L  GTKGKR+  PN RV++HQP GG  G   D+  QA+ I+H K     I S  TG++ +QV  D DRDR+ +  EA++Y
Sbjct:    5 GIQPSVFDRLLKDRIIWLGSEVRDENANEIAAKLLLLAAEDSKRDIYLYINSPGGSITAGMAIYDTMQFVPNDIVTVGIGMAASMGQLLLTAGTKGKRYITPNARVLLHQPHGGFGGTASDIRTQAQLILHMKKRLAEITSEATGKTVDQVNADGDRDRWFTAQEALDY 173          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_BACC1 (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus cereus (strain ATCC 10987) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.086e-37
Identity = 73/165 (44.24%), Postives = 113/165 (68.48%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RI+ +G+ I+D VA ++++QLL L+A+D  KDI L++NSPGGS  A  AI D + L+  +V T+ +G++AS  +L+L  G KGKRFA+PN+ +MIHQP+GG  GQ  ++EI A+ I+  K +  +II+  TG+  E++  D +RD +M+  EA EY
Sbjct:   19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTXAGFAILDXMNLIXPEVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RICFE (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia felis GN=clpP PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37
Identity = 73/183 (39.89%), Postives = 121/183 (66.12%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +S  P       RG  A D    L +ERI+F+ + ++D +A+ +++QLL L+A++P KDI +++NSPGG ++A +AIYD +Q ++  V+T+ +G + S  SL+L GG KG R+++P++R+MIHQP GG  GQ  D+EI A+E +  K     + S  TG+  + ++K ++RD +MSP EA ++
Sbjct:    1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRIMIHQPSGGYRGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEAKKF 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_HAMD5 (ATP-dependent Clp protease proteolytic subunit OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=clpP PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37
Identity = 71/183 (38.80%), Postives = 118/183 (64.48%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  A D    + +ER++FL   +++ +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q +  DVST+ +G + S  + +L  G K KR+ +PN RVMIHQP+GG  GQ  D+EI A+EI+  K     +++  T ++ + ++KD +RD ++S  EA +Y
Sbjct:   14 MTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFITPDVSTICIGQACSMGAFLLAAGAKSKRYCLPNARVMIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKTLKIIEKDTERDHFLSAEEAKKY 196          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_RHIL3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37
Identity = 76/180 (42.22%), Postives = 114/180 (63.33%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEA 758
            ++  P       RG  + D    L +ERI+FL   ++D +A  + +QLL L+A++P K+I L++NSPGG ++A MAIYD +Q ++  VST+ +G +AS  SL+L  G K  RFA PN+R+M+HQP GG  GQ  D+E  AR+I+  K     +    TGR++E+V+K +DRD +M   EA
Sbjct:    1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEA 180          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_SALRD (ATP-dependent Clp protease proteolytic subunit 1 OS=Salinibacter ruber (strain DSM 13855) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37
Identity = 77/187 (41.18%), Postives = 121/187 (64.71%), Query Frame = 3
Query:  213 DVPLSS-APQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D P S   P+      RG  A D    L +ERIVF+G  I+D +A+  ++QLL L+++  ++ I +++NSPGG + + + +YD +Q V A +ST  +G++AS  S++L GG  G+R  +PN+RVM+HQPMGG  GQ  D+EIQA+E+   K    +I+S  TG+  +Q+++D DR+ ++S  EA EY
Sbjct:   15 DQPQSGLVPKVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAASMGSVLLAGGEDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHTGKDIDQIEEDADRNHWLSAEEAQEY 201          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_STRP7 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain 70585) GN=clpP PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37
Identity = 75/167 (44.91%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASG--QVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RI+ L   ++D +A+++I+QLL LDAQD TKDI L+VN+PGGS+SA +AI D +  ++ADV T+ +GM+AS  ++I   G KGKRF +PN   MIHQPMGG  G  Q  D+ I A  ++  ++   +I++  +G+S E+V  D +RD +MS  E +EY
Sbjct:   17 DIYSRLLKDRIIMLTGPVEDSMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEY 183          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP1_TROW83.894e-3746.88ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_CAEEL5.086e-3745.45ATP-dependent Clp protease proteolytic subunit, mi... [more]
CLPP2_SALRD5.086e-3743.32ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_LEIXX5.086e-3745.56ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_BACC15.086e-3744.24ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_RICFE6.643e-3739.89ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_HAMD56.643e-3738.80ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_RHIL36.643e-3742.22ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_SALRD6.643e-3741.18ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_STRP78.675e-3744.91ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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