CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURMA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei GN=clpP PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44
Identity = 86/183 (46.99%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P    T+ RG  + D    L +ERIVF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS  + +L  G KGKR+A+PN RVMIHQP+GGA GQ  D+EIQAREI++ +D    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:   14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAY 196          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURM9 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10229) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44
Identity = 86/183 (46.99%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P    T+ RG  + D    L +ERIVF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS  + +L  G KGKR+A+PN RVMIHQP+GGA GQ  D+EIQAREI++ +D    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:   24 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BURM7 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10247) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44
Identity = 86/183 (46.99%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P    T+ RG  + D    L +ERIVF+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS  + +L  G KGKR+A+PN RVMIHQP+GGA GQ  D+EIQAREI++ +D    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:   24 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAY 206          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.289e-44
Identity = 86/171 (50.29%), Postives = 121/171 (70.76%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG  IDD VA++I++QLL L A+DP KDI L++NSPGGS++A MAIYD +Q ++ +VST+ +GM+AS  + +L  G KGKRFA+PN+ VMIHQP+GG  GQ  D+EI  R I+  ++   RI++  TG+  EQ+ KD DRD +M+  +A EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SYNFM (ATP-dependent Clp protease proteolytic subunit OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 89/183 (48.63%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +S  P     + RG  A D    L R+RI+FLG  I D VA+ II+QLL L+++DP KDI  ++NSPGG ++A +AIYD +Q ++ +VST+ +G +AS A+++L  G KGKR+A+P+ R+M+HQPMGG  GQ  DVEIQA+EI+  ++    I+   TGR  EQ+Q+D DRD YMS  +A EY
Sbjct:    1 MSLIPIVVEQSSRGERAFDIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPGGLVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGFQGQATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQAREY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RALEJ (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain JMP134) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 86/183 (46.99%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ER+VFL   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA +AIYD +Q V+ DV T+ +GM+AS  + +L  G KGKR A+PN+R+MIHQP+GGA GQ  D+EIQAREI++ ++    I+S  TG+  E++ +D DRD +MS  +AV+Y
Sbjct:   23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDY 205          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RALEH (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 84/183 (45.90%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ER+VF+   ++D  A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DVST+ +GM+AS  + +L  G KGKR A+PN+R+MIHQP+GGA GQ  D+EIQAREI++ ++    I+S  TG+  E++ +D DRD +MS  +AV+Y
Sbjct:   23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDY 205          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 83/179 (46.37%), Postives = 124/179 (69.27%), Query Frame = 3
Query:  234 PQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P     + RG  A D    L +ER++FL   ++D++A+ I +QLL L+A++P KDI L++NSPGGS++A MAIYD +Q ++ADVST  +G + S  + +L GG KGKRF +PN+RVMIHQP+GG  GQ  D+EI A+EI+  ++    +++  TG+S E +++D +RD +MS   AVEY
Sbjct:   21 PMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEY 199          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_JANMA (ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium sp. (strain Marseille) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 87/183 (47.54%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ERI+FL   ++D +A+ I++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ +VST+  G++AS  + +L  G KGKRF++PN+R+MIHQP+GGA GQ  D+EIQAREI++ ++    I++  TG+S E++ KD DRD +MS   AV Y
Sbjct:   17 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAAVTY 199          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DESAA (ATP-dependent Clp protease proteolytic subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=clpP PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.296e-44
Identity = 83/183 (45.36%), Postives = 125/183 (68.31%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +S  P       RG    D    L ++RI+FLG  ++D VA++II+QLL L++ DP KDI  ++NSPGGS++A MAIYD +  ++ +++TV +G +AS  +++L  G  GKR+++PN R++IHQPMGG  GQ  D+ IQA+EI+  K+    I++  TG+  +QVQ+D DRD +MSP+EA EY
Sbjct:    1 MSYIPYVVEQTSRGERTYDIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPGGSVTAGMAIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARILIHQPMGGFQGQASDIAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEAKEY 183          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BURMA3.289e-4446.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM93.289e-4446.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM73.289e-4446.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACHD3.289e-4450.29ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_SYNFM4.296e-4448.63ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RALEJ4.296e-4446.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RALEH4.296e-4445.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PSEMY4.296e-4446.37ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_JANMA4.296e-4447.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESAA4.296e-4445.36ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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