CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SALHS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella heidelberg (strain SL476) GN=clpP PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SALEP (ATP-dependent Clp protease proteolytic subunit OS=Salmonella enteritidis PT4 (strain P125109) GN=clpP PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SALCH (ATP-dependent Clp protease proteolytic subunit OS=Salmonella choleraesuis GN=clpP PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RALSO (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum GN=clpP PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 83/183 (45.36%), Postives = 128/183 (69.95%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ER++F+   ++D  A+ +++QLL L++++P KDI L++NSPGGS+SA +A+YD +Q V+ DVST+ +GM+AS  + +L  G KGKR+A+PN+R+MIHQP+GGA GQ  D+EIQAREI++ ++    I+S  TG+  +++ +D DRD +MS  +A EY
Sbjct:   23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEY 205
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 89/185 (48.11%), Postives = 123/185 (66.49%), Query Frame = 3 
Query:  216 VPLSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +P    P       RG  + D    L ++RIVFLG  IDD VA+ +I+QLL L+++DP KDI L++NSPGGS+++ +AIYD +Q V+  VST+ LG +AS  + +L GG  GKRFA+PN R+MIHQPMGG  GQ  D++IQAREI+  K     I++  T +  E+++KD DRD +M   EA EY
Sbjct:    1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEY 185
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 87/185 (47.03%), Postives = 125/185 (67.57%), Query Frame = 3 
Query:  216 VPLSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            +P    P       RG  + D +  L ++RIV LG  IDD VA+ I++QLL L+++DP KDI L++NSPGGS++A +AIYD +Q V+  VST+ +G +AS  +++L  G KGKR+A+P++R+MIHQP+GG  GQ  D+EIQA+EI+  K     +I   TG+S E+V+KD DRD +M   EA  Y
Sbjct:    1 MPFMPVPYVIEQTHRGERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAY 185
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_BURXL (ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia xenovorans (strain LB400) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 85/183 (46.45%), Postives = 127/183 (69.40%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P    T+ RG  + D    L +ERIVFL   ++D  A+ +++Q+L L++++P KDI  ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS  + +L  G KGKRFA+PN+RVMIHQP+GGA GQ  D+EIQAREI++ K+    +++  TG+  E++ +D DRD +MS  +A  Y
Sbjct:   24 LGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAY 206
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus thuringiensis subsp. konkukian GN=clpP2 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 83/171 (48.54%), Postives = 125/171 (73.10%), Query Frame = 3 
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++A MAIYD +Q ++  VST+ +GM+AS  + +L  G KGKR+A+PN+ VMIHQP+GGA GQ  ++EI A+ I+  ++   +I++  TG+  E +Q+D DRD +M+  +A+EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEY 183
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCZ (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ZK / E33L) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 83/171 (48.54%), Postives = 125/171 (73.10%), Query Frame = 3 
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++A MAIYD +Q ++  VST+ +GM+AS  + +L  G KGKR+A+PN+ VMIHQP+GGA GQ  ++EI A+ I+  ++   +I++  TG+  E +Q+D DRD +M+  +A+EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEY 183
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SALNS9.570e-4444.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALHS9.570e-4444.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALEP9.570e-4444.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALCH9.570e-4444.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RALSO9.570e-4445.36ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANADF9.570e-4448.11ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_MYXXA9.570e-4447.03ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BURXL9.570e-4446.45ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACHK9.570e-4448.54ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACCZ9.570e-4448.54ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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