CK933175

Overview
NameCK933175
Unique NameCK933175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAC (GTPase obg OS=Staphylococcus aureus (strain COL) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAB (GTPase obg OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSAPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA9 (GTPase obg OS=Staphylococcus aureus (strain JH9) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA8 (GTPase obg OS=Staphylococcus aureus (strain NCTC 8325) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA3 (GTPase obg OS=Staphylococcus aureus (strain USA300) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA2 (GTPase obg OS=Staphylococcus aureus (strain JH1) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA1 (GTPase obg OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2
Query:   71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598
            SR  +P+   P  S+  E   E  +         +G+VG P+VGKSTL + ++K       + F TI+PN   V+ PD+R           S V A     D+ GL+ GA +G GLG+ FL H+     I H++        +   +  +P+ D +VI+ EL        E+R+ED
Sbjct:  127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_PETMO (GTPase obg OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2
Query:  173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHV--LRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEK 607
            +G++G PNVGKSTL + ++   +   ++PF TI PN   V + D  + ++               + DI GL+ GAH G+GLG+ FL HI     + H+  +  FE  D   V+D ++  ++LE  S  L  K    +  +I+ V+K
Sbjct:  164 VGLIGYPNVGKSTLISRISNAKVEIADYPFTTIVPNLGVVKV-DTDYSFV---------------VADIPGLIEGAHLGKGLGDQFLRHIERCSVLVHLIDISCFERDD--PVEDYINIRKELESFSHILLKKKEIIVANKIDAVDK 292          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_HALOH (GTPase obg OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556
            P+ ++  E   ER I         +G++G PNVGKSTL + +++      N+ F T++PN   V            L + KS V A     DI GL+ GAH+G GLG+ FL HI     + H++      DI  ++   DP+ D + I+ EL
Sbjct:  137 PRFAEKGEPGEERSIRLELKLVADVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVV-----------ALSEYKSFVMA-----DIPGLIEGAHQGVGLGDEFLRHIERTRLLIHII------DISGIEGR-DPLEDFKTINREL 265          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DESDA (GTPase obg OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=obg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12
Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 2
Query:  176 GIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI----PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDV 697
            G++GLPN GKST  + ++        +PF T+ PN   V I    PD R                 + I DI GL+ GAHEGQGLG  FL H+     + H+L + ED     V D  DP     +++ ELR  D E  ERR  +V   +   + ++L+    L +R +A   DG++V
Sbjct:  165 GLIGLPNAGKSTFISQVSAARPKIAAYPFTTLTPNLG-VMIDEVDPDRR-----------------MVIADIPGLIEGAHEGQGLGLRFLKHVERTRFLVHIL-SIED-----VGDE-DPWAGFSLVNEELRRFDAELGERRQIEVVNKIDLVSPERLE---ALKERARA---DGREV 311          
The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
OBG_STAAC3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain COL) G... [more]
OBG_STAAB3.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain bovine... [more]
OBG_STAA93.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain JH9) G... [more]
OBG_STAA83.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain NCTC 8... [more]
OBG_STAA33.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain USA300... [more]
OBG_STAA23.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain JH1) G... [more]
OBG_STAA13.889e-1230.68GTPase obg OS=Staphylococcus aureus (strain Mu3 / ... [more]
OBG_PETMO3.889e-1231.97GTPase obg OS=Petrotoga mobilis (strain DSM 10674 ... [more]
OBG_HALOH3.889e-1232.89GTPase obg OS=Halothermothrix orenii (strain H 168... [more]
OBG_DESDA3.889e-1233.71GTPase obg OS=Desulfovibrio desulfuricans (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bp
GGGGAGACGCAGACTCAGACTCAGACTCGCATCTTACTTACTCAGTCTGC
AAAACCCTAGGACTAGAAGAAGTAGAGCTCTCTCTCCGAAACTAATGCCG
CCAAAAGCTTCAAAATCCAAAGAAGCGCCAGCTGAGCGCCCCATCCTAGG
CCGATTCTCTTCTCATCTCAAGATTGGCATTGTTGGATTGCCAAATGTTG
GCAAATCTACACTTTTCAACACGCTCACTAAGTTAGCAATACCCGCCGAG
AATTTCCCTTTTTGCACCATCGAGCCCAATGAAGCTCGGGTTAATATCCC
TGATGAGCGATTTGAGTGGCTTTGCCAGTTGTTCAAGCCAAAAAGCGCGG
TTCCAGCTTTCCTGGAGATCCATGATATAGCTGGACTAGTTAGAGGAGCC
CATGAAGGACAAGGTTTGGGCAACAGTTTCTTATCTCACATCCGTGCGGT
TGGCGGAATTTTTCATGTTCTACGTGCATTTGAAGATCCCGACATTATCC
ATGTTGATGACTCTGTCGATCCTGTGAGGGATTTAGAGGTTATAAGTGCA
GAATTACGGCTAAAGGATATTGAATTCATGGAAAGGAGGATTGAAGATGT
TGAGAAGAGCATGAAGAGGAGCAATGACAAACAGTTAAAAATAGAGCATG
AGTTGTGTCAAAGGGTTAAGGCCTGGCTTCAGGATGGAAAAGACGTCCGC
CTTGGGGATTGGAAAGCCGCTGACATTGAGATACTGAATACTTTTCAATT
GCTTACTGCCAAGCCTGTAGTTTACTTGGTTAACATGAATGAGAAGGATT
ACCAAAGAAAGAAAAACAAGTTCTTGCCCAAGATTCACGCTTGGGTTCAA
GAGCATGGGGGCGAACAAATTATTCCTTTCAGTTGTGCGT
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