CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAC (GTPase obg OS=Staphylococcus aureus (strain COL) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAAB (GTPase obg OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSAPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA9 (GTPase obg OS=Staphylococcus aureus (strain JH9) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA8 (GTPase obg OS=Staphylococcus aureus (strain NCTC 8325) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA3 (GTPase obg OS=Staphylococcus aureus (strain USA300) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA2 (GTPase obg OS=Staphylococcus aureus (strain JH1) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_STAA1 (GTPase obg OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 54/176 (30.68%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIED 598 SR +P+ P S+ E E + +G+VG P+VGKSTL + ++K + F TI+PN V+ PD+R S V A D+ GL+ GA +G GLG+ FL H+ I H++ + + +P+ D +VI+ EL E+R+ED Sbjct: 127 SRFATPRNPAPDFSEKGEPGEELDVSLELKLLADVGLVGFPSVGKSTLLSIVSKAKPKIGAYHFTTIKPNLGVVSTPDQR-----------SFVMA-----DLPGLIEGASDGVGLGHQFLRHVERTKVIVHMID-------MSGSEGREPIEDYKVINQELAA-----YEQRLED 274
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_PETMO (GTPase obg OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHV--LRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEK 607 +G++G PNVGKSTL + ++ + ++PF TI PN V + D + ++ + DI GL+ GAH G+GLG+ FL HI + H+ + FE D V+D ++ ++LE S L K + +I+ V+K Sbjct: 164 VGLIGYPNVGKSTLISRISNAKVEIADYPFTTIVPNLGVVKV-DTDYSFV---------------VADIPGLIEGAHLGKGLGDQFLRHIERCSVLVHLIDISCFERDD--PVEDYINIRKELESFSHILLKKKEIIVANKIDAVDK 292
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_HALOH (GTPase obg OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556 P+ ++ E ER I +G++G PNVGKSTL + +++ N+ F T++PN V L + KS V A DI GL+ GAH+G GLG+ FL HI + H++ DI ++ DP+ D + I+ EL Sbjct: 137 PRFAEKGEPGEERSIRLELKLVADVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVV-----------ALSEYKSFVMA-----DIPGLIEGAHQGVGLGDEFLRHIERTRLLIHII------DISGIEGR-DPLEDFKTINREL 265
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DESDA (GTPase obg OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=obg PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 2 Query: 176 GIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI----PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDV 697 G++GLPN GKST + ++ +PF T+ PN V I PD R + I DI GL+ GAHEGQGLG FL H+ + H+L + ED V D DP +++ ELR D E ERR +V + + ++L+ L +R +A DG++V Sbjct: 165 GLIGLPNAGKSTFISQVSAARPKIAAYPFTTLTPNLG-VMIDEVDPDRR-----------------MVIADIPGLIEGAHEGQGLGLRFLKHVERTRFLVHIL-SIED-----VGDE-DPWAGFSLVNEELRRFDAELGERRQIEVVNKIDLVSPERLE---ALKERARA---DGREV 311 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |