CK933175

Overview
NameCK933175
Unique NameCK933175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_PROM9 (GTPase obg OS=Prochlorococcus marinus (strain MIT 9312) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 50/158 (31.65%), Postives = 75/158 (47.47%), Query Frame = 2
Query:  170 KIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKI 643
            ++GI+GLPN GKSTL + L+       N+PF T+ PN   V   D      C LF             DI GL+ GA +G GLG+ FL HI+    + H++ +  +          +P+ D E+I  ELR      +++    V   M+  +D  L+I
Sbjct:  161 EVGIIGLPNAGKSTLISVLSSARPKIANYPFTTLIPNLGVVRKVDGNG---C-LFA------------DIPGLISGAADGVGLGHDFLRHIQRTKILVHLIDSIAE----------NPIHDFEIIEQELRKYGKGLIDKERIIVLNKMELVDDDYLQI 292          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_NAUPA (GTPase obg OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 45/137 (32.85%), Postives = 65/137 (47.45%), Query Frame = 2
Query:   86 PKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHV--LRAFEDP 490
            P+   P+ ++  E   E  I+        +G+VG PN GKSTL +TL+       N+ F T+ P    V + + R           S V A     DI G++ GAHEG+GLG  FL HI     I ++  L ++ DP
Sbjct:  132 PRNQTPRYAQPGEEGQELEIVLELKLIADVGLVGFPNAGKSTLISTLSNARPEIANYEFTTLTPKLGVVRVDEYR-----------SFVMA-----DIPGIIEGAHEGKGLGIEFLKHIERTSTILYMIDLSSYRDP 252          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_LAWIP (GTPase obg OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 2
Query:   83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARV--NI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586
            S  +  P+ ++  E   E+ +          GI+GLPN GKSTL + L+        +PF T+ PN   +  N+ PD+R                 L + DI GL+ GA +GQGLG+ FL HI     + HVL      DI    D  +P    ++++ EL+  D   M+R
Sbjct:  134 SSTMRTPRFAQKGEMGEEKYLRLELKILADAGIIGLPNAGKSTLISKLSAAQPKIAAYPFTTLNPNLGVMIDNLDPDKR-----------------LVLADIPGLIEGACKGQGLGHQFLKHIERTRFLIHVL---SSEDI----DEDNPWLGFDIVNEELKEFDHTLMQR 280          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_LACS1 (GTPase obg OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 49/168 (29.17%), Postives = 76/168 (45.24%), Query Frame = 2
Query:   83 SPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586
            SPK   P+ +++ E   ER +         +G+VG P+VGKSTL + +T        + F T+ PN   V + D R   +                 D+ GL+ GA +G GLG  FL H+     I H++      D+  V+   DP  D   I+ EL++ D   ++R
Sbjct:  131 SPKNPAPEIAENGEPGEERKLKLELKVLADVGLVGFPSVGKSTLLSVVTSAKPKIAEYHFTTLVPNLGMVRLDDGRDYVMA----------------DLPGLIEGASQGVGLGIQFLRHVERTRVILHLI------DMSGVEGR-DPYDDFVKINEELKVYDPTLLDR 275          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_HYPNA (GTPase obg OS=Hyphomonas neptunium (strain ATCC 15444) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 52/187 (27.81%), Postives = 76/187 (40.64%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER-------RIEDVEKSMKRSNDKQLK 640
            P+ S   E   ER I  R       G+VGLPN GKST  +  T       ++PF T+ P    V++                       + DI GL+ GA EG GLG+ FL H+     + H++   +D          DP      I +EL   D +F +R       +I+ +   + +   KQLK
Sbjct:  138 PRRSNPGEEGEERWIWLRLKLIADAGLVGLPNAGKSTFLSVATAANPKIADYPFTTLHPGLGVVDL----------------GTSTRFVLADIPGLIEGAAEGAGLGHRFLGHVERCKVLLHLIDCTQD----------DPAGAYRTIRSELEAYDADFADRPEIVALNKIDALTPELVKEQLKQLK 298          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_HAHCH (GTPase obg OS=Hahella chejuensis (strain KCTC 2396) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 60/235 (25.53%), Postives = 99/235 (42.13%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD----IEFMERRIEDVEKS-----MKRSNDKQLKIE---------HELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQL 751
            P+ +K  +    R I         +G++GLPN GKSTL   ++       ++PF T+ PN   V +   R               +F+ + DI GL+ GA +G GLG  FL H+     + HV+      +   V+ +V  V +LE  S  L  +D    +   +   ED +++     +KR N      E           LCQ +  W++   +    D + A+ + LN  Q+
Sbjct:  138 PRQTKPGQPGESRNIRLELKVLADVGLLGLPNAGKSTLIRGISSAKPKVADYPFTTLVPNLGVVRVQAHR---------------SFV-VADIPGLIEGAADGAGLGIRFLKHLVRTRLLLHVVDVSPLDESDPVESAVKIVAELEKFSPALAARDRWLVLNKTDLLAEDEKEAICADILKRLNWSGPSYEISALAGEGLQRLCQDIMTWIERRAEEERDDPEVAEADRLNREQM 356          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_HAEDU (GTPase obg OS=Haemophilus ducreyi GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 45/152 (29.61%), Postives = 76/152 (50.00%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556
            P+   +  A  +R +L        +G++GLPN GKST   +++       ++PF T+ P+     +  +R               +F+ + DI GL+ GA EG GLG  FL H+     + H++      DI+ +D+S DPV+++ VI +EL
Sbjct:  138 PRQKTNGTAGEKRDLLLELMLLADVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGSDR---------------SFV-VADIPGLIEGAAEGAGLGIRFLKHLERCRVLIHLV------DIMPIDES-DPVQNITVIESEL 266          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_GEOBB (GTPase obg OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 53/183 (28.96%), Postives = 84/183 (45.90%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERR----IEDVEKSMKRSNDKQL 637
            PK ++  E   ER I         +G++G+P+VGKS+L   ++        + F T++P+   V   + R           S V A     DI GL+ GA EG GLG+ FL H+   G + H+L     PD        DP+ + E I+ EL L + E  ++R    +  ++    R N K++
Sbjct:  138 PKFAQPGEPGEERWIRMELKLMADVGLLGMPSVGKSSLIAKISAARPKIAEYHFTTLKPSLGVVQYKNYR-----------SFVMA-----DIPGLIEGASEGAGLGHRFLKHLERTGQLLHLLDLSWMPD-------RDPIAEYEAINRELALFNPELADKRQTVVVNKIDLPHVRENLKEI 297          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_COXBR (GTPase obg OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556
            P+ + S E    R +         +G++GLPN GKST  + ++K      ++PF T+ P+   V + + R               +F+ I DI GL+ GA EG GLG  FL H+     + H++      DI  +D S DPV+ ++ I +EL
Sbjct:  138 PRRTISGEEGEARELKLELKLLADVGLLGLPNAGKSTFIHAVSKATPKIADYPFTTLYPHLGVVRVEEYR---------------SFV-IADIPGLIEGASEGAGLGVQFLKHLERTQLLLHIV------DIAPLDGS-DPVQSIQAIISEL 266          
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ANASK (GTPase obg OS=Anaeromyxobacter sp. (strain K) GN=obg PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 44/152 (28.95%), Postives = 69/152 (45.39%), Query Frame = 2
Query:  101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556
            P+ ++     AER ++        +GIVG PN GKSTL + +++      ++PF T+ PN   V   +  F                  + DI GL+ GAH G GLG+ FL H+     + H++         + +    P  DL+ I+AEL
Sbjct:  138 PRYAEDGTPGAERDLVLELKLLADVGIVGYPNAGKSTLISRISRARPKIADYPFTTLTPNLGVVGWRERSF-----------------VVADIPGLIEGAHAGAGLGHQFLRHVERCRVLIHLVEG------ANPEPGRAPRADLDAINAEL 266          
The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 306
Match NameE-valueIdentityDescription
OBG_PROM95.616e-1131.65GTPase obg OS=Prochlorococcus marinus (strain MIT ... [more]
OBG_NAUPA5.616e-1132.85GTPase obg OS=Nautilia profundicola (strain ATCC B... [more]
OBG_LAWIP5.616e-1130.99GTPase obg OS=Lawsonia intracellularis (strain PHE... [more]
OBG_LACS15.616e-1129.17GTPase obg OS=Lactobacillus salivarius subsp. sali... [more]
OBG_HYPNA5.616e-1127.81GTPase obg OS=Hyphomonas neptunium (strain ATCC 15... [more]
OBG_HAHCH5.616e-1125.53GTPase obg OS=Hahella chejuensis (strain KCTC 2396... [more]
OBG_HAEDU5.616e-1129.61GTPase obg OS=Haemophilus ducreyi GN=obg PE=3 SV=1[more]
OBG_GEOBB5.616e-1128.96GTPase obg OS=Geobacter bemidjiensis (strain Bem /... [more]
OBG_COXBR5.616e-1130.92GTPase obg OS=Coxiella burnetii (strain RSA 331 / ... [more]
OBG_ANASK5.616e-1128.95GTPase obg OS=Anaeromyxobacter sp. (strain K) GN=o... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bp
GGGGAGACGCAGACTCAGACTCAGACTCGCATCTTACTTACTCAGTCTGC
AAAACCCTAGGACTAGAAGAAGTAGAGCTCTCTCTCCGAAACTAATGCCG
CCAAAAGCTTCAAAATCCAAAGAAGCGCCAGCTGAGCGCCCCATCCTAGG
CCGATTCTCTTCTCATCTCAAGATTGGCATTGTTGGATTGCCAAATGTTG
GCAAATCTACACTTTTCAACACGCTCACTAAGTTAGCAATACCCGCCGAG
AATTTCCCTTTTTGCACCATCGAGCCCAATGAAGCTCGGGTTAATATCCC
TGATGAGCGATTTGAGTGGCTTTGCCAGTTGTTCAAGCCAAAAAGCGCGG
TTCCAGCTTTCCTGGAGATCCATGATATAGCTGGACTAGTTAGAGGAGCC
CATGAAGGACAAGGTTTGGGCAACAGTTTCTTATCTCACATCCGTGCGGT
TGGCGGAATTTTTCATGTTCTACGTGCATTTGAAGATCCCGACATTATCC
ATGTTGATGACTCTGTCGATCCTGTGAGGGATTTAGAGGTTATAAGTGCA
GAATTACGGCTAAAGGATATTGAATTCATGGAAAGGAGGATTGAAGATGT
TGAGAAGAGCATGAAGAGGAGCAATGACAAACAGTTAAAAATAGAGCATG
AGTTGTGTCAAAGGGTTAAGGCCTGGCTTCAGGATGGAAAAGACGTCCGC
CTTGGGGATTGGAAAGCCGCTGACATTGAGATACTGAATACTTTTCAATT
GCTTACTGCCAAGCCTGTAGTTTACTTGGTTAACATGAATGAGAAGGATT
ACCAAAGAAAGAAAAACAAGTTCTTGCCCAAGATTCACGCTTGGGTTCAA
GAGCATGGGGGCGAACAAATTATTCCTTTCAGTTGTGCGT
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