CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CLOBK (GTPase obg OS=Clostridium botulinum (strain Okra / Type B1) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 74 RALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 R +P P ++ ER I +G++G PNVGKSTL + ++K N+ F T++PN V+I V F+ I DI G++ GA EG GLG FL H+ + HV+ DI V+ DP D I+ EL+ ++ +R Sbjct: 128 RFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKARPKIANYHFTTLKPNLGVVSI---------------EGVNNFV-IADIPGIIEGASEGVGLGLDFLRHVERTRVLIHVI------DISSVEGR-DPYDDFLKINEELKRYSVKLYDR 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CLOBH (GTPase obg OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 74 RALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 R +P P ++ ER I +G++G PNVGKSTL + ++K N+ F T++PN V+I V F+ I DI G++ GA EG GLG FL H+ + HV+ DI V+ DP D I+ EL+ ++ +R Sbjct: 128 RFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKARPKIANYHFTTLKPNLGVVSI---------------EGVNNFV-IADIPGIIEGASEGVGLGLDFLRHVERTRVLIHVI------DISSVEGR-DPYDDFLKINEELKRYSVKLYDR 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CLOB1 (GTPase obg OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 74 RALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 R +P P ++ ER I +G++G PNVGKSTL + ++K N+ F T++PN V+I V F+ I DI G++ GA EG GLG FL H+ + HV+ DI V+ DP D I+ EL+ ++ +R Sbjct: 128 RFTTPTRQAPDFAEPGMPEEERWIKLELKLLADVGLIGFPNVGKSTLLSVVSKARPKIANYHFTTLKPNLGVVSI---------------EGVNNFV-IADIPGIIEGASEGVGLGLDFLRHVERTRVLIHVI------DISSVEGR-DPYDDFLKINEELKRYSVKLYDR 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BORPD (GTPase obg OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 47/142 (33.10%), Postives = 67/142 (47.18%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDP----VRDLEVISAELRLKDIEFMER 586 +G++GLPN GKSTL + ++ ++PF T+ PN V SA +F+ + DI GL+ GA EG GLG+ FL H+ + H++ DI D DP V D I ELR D E ++ Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKVADYPFTTLHPNLGVVR---------------TSASRSFV-VADIPGLIEGASEGAGLGHLFLRHLARTRVLLHLV------DISSPDPDTDPIEQAVADARAIVEELRRYDPELADK 281
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BORA1 (GTPase obg OS=Bordetella avium (strain 197N) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLR-AFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++GLPN GKSTL + ++ ++PF T+ PN V R +F+ + DI GL+ GA EG GLG+ FL H+ + H++ + DPD ++ +V+ R I ELR D E E+ Sbjct: 162 VGLLGLPNAGKSTLISRISNARPKIADYPFTTLHPNLGVVRTSPSR---------------SFV-VADIPGLIEGASEGAGLGHLFLRHLARTRVLLHLVDVSSPDPDADPIESAVENAR---AIVEELRRYDPELAEK 281
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ACHLI (GTPase obg OS=Acholeplasma laidlawii (strain PG-8A) GN=obg PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 107 ASKSKEAP--AERPILGR-FSSHLK------IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 AS + +AP AE+ LG+ F + ++ +G++G PNVGKSTL ++ ++ F T+ P VN+ D+ F + D+ GL+ AH G GLG FL H+ + H++ DS+DP+ D I+ EL L D + +R Sbjct: 131 ASNNNKAPDFAEQGDLGQIFLAKVELQVLADVGLLGYPNVGKSTLITRISNAKAKIADYQFTTLSPQLGMVNVEDDAF-----------------VVADLPGLIEFAHLGVGLGLQFLKHVERCRVLLHIVSM----------DSLDPLDDYNKINNELVLYDEKLKDR 272 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |