CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURA4 (GTPase obg OS=Burkholderia ambifaria (strain MC40-6) GN=obg PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + + I ELR D E+ Sbjct: 141 KTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDENVDPVAEAKAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ACIAC (GTPase obg OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=obg PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKST ++ ++PF T+ PN V + P++ F + DI GL+ GA EG GLG+ FL H++ + HV+ D+ D+SVDPV I ELR D E E+ Sbjct: 162 VGLLGMPNAGKSTFIAAVSNARPKIADYPFTTLHPNLGVVRVGPEQSFV-----------------VADIPGLIEGASEGAGLGHQFLRHLQRTRLLLHVV------DLAPFDESVDPVAQATAIVGELRKYDAELYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RALPJ (GTPase obg OS=Ralstonia pickettii (strain 12J) GN=obg PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 45/139 (32.37%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKSTL ++ ++PF T+ PN V P + F + DI GL+ GA EG GLG+ FL H++ + HV+ D+ D+SVDPV + + I EL+ D E ++ Sbjct: 162 VGLLGMPNAGKSTLITAISNARPKIADYPFTTLHPNLGVVRTGPSKSF-----------------VVADIPGLIEGAAEGAGLGHQFLRHLQRTRVLLHVV------DLAPFDESVDPVAEAKAIVGELKKYDAELFDK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURTA (GTPase obg OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=obg PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+SVDPV + + I ELR D Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDESVDPVAEAKAIVGELRKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURCM (GTPase obg OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=obg PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLRLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPSKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGVLLHLV------DLAPFDENVDPVAEARAIVGELRKYDEALYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_ACISJ (GTPase obg OS=Acidovorax sp. (strain JS42) GN=obg PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKST ++ ++PF T+ PN V + P++ F + DI GL+ GA EG GLG+ FL H++ + HV+ D+ D+SVDPV + I AEL+ D + E+ Sbjct: 162 VGLLGMPNAGKSTFIAAVSNARPKIADYPFTTLHPNLGVVRVGPEQSFV-----------------VADIPGLIEGASEGAGLGHQFLRHLQRTRLLLHVV------DMAPFDESVDPVAQAKAIVAELKKYDTQLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: YHOF_SCHPO (Uncharacterized GTP-binding protein C428.15 OS=Schizosaccharomyces pombe GN=SPBC428.15 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 47/112 (41.96%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLF------KP-----KSAVPAF-LEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVL 472 IG VG P+ GKST+ N LT NFPF TIEPN A I + E C F KP K+ V + +++ D+AGL+ GAH G+GLGN FL +R + HV+ Sbjct: 7 IGFVGKPSSGKSTMLNALTDATAKTGNFPFTTIEPNRA---IGYAQIECACSRFGLQDKCKPIYGGCKNGVRSIPIQLLDVAGLIPGAHAGKGLGNKFLDDLRHADALVHVV 115
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DESHD (GTPase obg OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 70/232 (30.17%), Postives = 100/232 (43.10%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPD-ERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRIEDVEKSMKRSNDKQLKIEHELCQRVKAWLQDGKDVRLGDWKAADIEILNTFQLLTAK 763 +R +S P +++ E ER +L +G+VG PNVGKST+ + ++ ++ F T+ PN V + D E F + DI GL+ GAH G GLG+ FL H I HVL DI ++ DP+ D ++I+ ELR E R I V +N + E QR+ L G+D R+ AA E L AK Sbjct: 127 ARFMSNTNKAPTVAENGEPGEERNLLLELKLLADVGLVGFPNVGKSTIISRISAAKPKIADYHFTTLVPNLGVVELEDGESF-----------------VVADIPGLIEGAHTGAGLGHEFLRHTERTRLILHVL------DIAGSEER-DPLEDFQIIAEELRQYSQELANRPILIV------ANKMDIPGAEENLQRLTEKL--GEDYRIFPVSAATGEGLKELVYAAAK 326
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DECAR (GTPase obg OS=Dechloromonas aromatica (strain RCB) GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556 +G++GLPN GKSTL ++ ++PF T+ PN V + DE KS V A D+ GL+ GA +G GLG FL H++ + H++ DI +D DPVRD + I EL Sbjct: 162 VGLLGLPNAGKSTLIRAISSARPKVADYPFTTLHPNLGVVRVDDE-----------KSFVMA-----DVPGLIEGAADGAGLGIRFLKHLQRTRILLHLV------DIAPIDPDSDPVRDAKAIVGEL 267
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CORGL (GTPase obg OS=Corynebacterium glutamicum GN=obg PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 107 ASKSKEAPA---------ERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAEL 556 ASK+++AP ++ S +G+VG P+ GKS+L + ++ ++PF T++PN VN+ E F + D+ GL+ GA EG+GLG FL HI + HV+ D +D DP+ D+E + AEL Sbjct: 131 ASKARKAPGFALIGEPGEAHDLILELKSMADVGLVGFPSAGKSSLISVMSAAKPKIGDYPFTTLQPNLGVVNVGHETF-----------------TMADVPGLIPGASEGKGLGLDFLRHIERTSVLVHVV------DTATMDPGRDPISDIEALEAEL 266 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |