CK933175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_FINM2 (GTPase obg OS=Finegoldia magna (strain ATCC 29328) GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 48/164 (29.27%), Postives = 79/164 (48.17%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMERRI 592 P+ ++ E E+ I +G++GLPNVGKSTL + ++ N+ F T+EPN + ++ F + DI GL+ GA EG GLG+ FL HI + HVL I + +P+ D E+I++EL +I+ ++++ Sbjct: 137 PRFAEPGEKGEEKTIKLELKLLADVGLIGLPNVGKSTLLSIMSNARPKIANYHFTTLEPNLGVCKVGEKSF-----------------VLADIPGLIEGASEGLGLGHDFLKHIERTKILVHVLD-------ISGSEGRNPIEDFELINSELSSYNIKLNDKKM 276
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DESPS (GTPase obg OS=Desulfotalea psychrophila GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 51/162 (31.48%), Postives = 74/162 (45.68%), Query Frame = 2 Query: 101 PKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 P+ + + E+ +L +G+VGLPN GKSTL + L+ ++PF T+EP ++ P S + I DI GLV GAH+G GLG+ FL H+ + HV+ A D DP D ++I ELR E +R Sbjct: 138 PRVATKGKLGEEKWLLIELKLMADVGLVGLPNAGKSTLLSKLSAANPKVADYPFTTLEPQLGMLHFP-----------MRNSCI-----IADIPGLVEGAHQGVGLGHKFLRHVERTKILVHVIDASAD----------DPFSDYDIIGNELRSYKEELADR 273
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BACHD (GTPase obg OS=Bacillus halodurans GN=obg PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 53/172 (30.81%), Postives = 80/172 (46.51%), Query Frame = 2 Query: 71 SRALSPKLMPPKASKSKEAPAERPILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +R +P P+ S++ E ER ++ G+VG P+VGKSTL + ++ + F TI PN V + D R +F+ + D+ GL+ GAHEG GLG+ FL HI I HV+ + + DP D I+ EL+ ++ MER Sbjct: 127 TRFATPANPAPELSENGEPGVERDVILELKVLADAGLVGFPSVGKSTLLSVVSSAKPKIAEYHFTTITPNLGVVRVDDGR---------------SFV-LADLPGLIEGAHEGIGLGHQFLRHIERTRVIVHVID-------MSALEGRDPYDDYVSINEELKAYNLRLMER 275
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_RALME (GTPase obg OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKD 568 +G++G+PN GKST + ++ ++PF T+ PN V + E+ +F+ + DI GL+ GA EG GLG+ FL H++ G + H++ DI D++VDPV + + I EL+ D Sbjct: 162 VGLLGMPNAGKSTFISHVSNARPKVADYPFTTLHPNLGVVRVDHEQ---------------SFV-VADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DIAPFDENVDPVAEAKAIVNELKKYD 271
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_DELAS (GTPase obg OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 45/138 (32.61%), Postives = 69/138 (50.00%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKST ++ ++PF T+ PN V + E+ +F+ + DI GL+ GA EG GLG+ FL H++ + HV+ D+ DDSVDPV + I EL+ D E + Sbjct: 162 VGLLGMPNAGKSTFIAAVSNARPKIADYPFTTLHPNLGVVRVAAEQ---------------SFV-VADIPGLIEGASEGAGLGHQFLRHLQRTRLLLHVV------DLAPFDDSVDPVAQAKAIVGELQKYDAELYNK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_CUPTR (GTPase obg OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 173 IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNIPDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 +G++G+PN GKST + ++ ++PF T+ PN V + E+ +F+ + DI GL+ GA EG GLG+ FL H++ G + H++ D+ D++VDPV + I EL+ D E+ Sbjct: 162 VGLLGMPNAGKSTFISHISNARPKVADYPFTTLHPNLGVVRVDHEQ---------------SFV-VADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHIV------DLAPFDEAVDPVAEARAIVNELKKYDETLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURPS (GTPase obg OS=Burkholderia pseudomallei GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURP6 (GTPase obg OS=Burkholderia pseudomallei (strain 668) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURP1 (GTPase obg OS=Burkholderia pseudomallei (strain 1710b) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277
BLAST of CK933175 vs. ExPASy Swiss-Prot
Match: OBG_BURP0 (GTPase obg OS=Burkholderia pseudomallei (strain 1106a) GN=obg PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13 Identity = 51/160 (31.87%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 113 KSKEAPAERPILGRFSSHLK-IGIVGLPNVGKSTLFNTLTKLAIPAENFPFCTIEPNEARVNI-PDERFEWLCQLFKPKSAVPAFLEIHDIAGLVRGAHEGQGLGNSFLSHIRAVGGIFHVLRAFEDPDIIHVDDSVDPVRDLEVISAELRLKDIEFMER 586 K+ P ER +L L +G++G+PN GKST ++++ ++PF T+ PN V + P + F I DI GL+ GA EG GLG+ FL H++ G + H++ D+ D+ VDPV + I ELR D E+ Sbjct: 141 KTDGKPGERRMLKLELKVLADVGLLGMPNAGKSTFISSVSNAKPKIADYPFTTLAPNLGVVRVGPGKSFV-----------------IADIPGLIEGAAEGAGLGHQFLRHLQRTGLLLHLV------DLAPFDERVDPVAEARAIVGELRKYDESLYEK 277 The following BLAST results are available for this feature:
BLAST of CK933175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933175 ID=CK933175; Name=CK933175; organism=Citrus sinensis; type=EST; length=890bpback to top |