CK933242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A_ASTRU (Histone H2A OS=Asterias rubens PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 62/97 (63.92%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ RFL+KG Y++RVG+GAP GNAARDNKK +I PRH+QLA+RNDEEL KLL+GVTIA GGVLPNI VLLPKKT Sbjct: 24 QFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A3_LYTPI (Histone H2A, sperm (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ RFL+KG Y+QRVG+GAP GNAA DNKK +IIPRH+QLA+RNDEEL KLL GVTIA GGVLPNI VLLPKKT Sbjct: 11 QFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVFEYLAAEILELAGNAAPDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 107
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A1_TETTH (Histone H2A.1 OS=Tetrahymena thermophila GN=HTA2 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNE 300 QFPVGRI RFLK GRYS+R+G+GAP GNAA+DNKK +I+PRH+ LA+RNDEEL KL+ TIA GGVLPNINP+LLP KT + Sbjct: 29 QFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 3.685e-28 Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNE 300 QFPVGRI RFLK GRYS+R+G+GAP GNAA+DNKK +I+PRH+ LA+RNDEEL KL+ TIA GGVLPNINP+LLP KT + Sbjct: 29 QFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A4_PSAMI (Late histone H2A.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.812e-28 Identity = 63/96 (65.62%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKK 291 QFPVGR+ RFL+KG Y+ RVG+GAP GNAARDNKK +IIPRH+QLAVRNDEEL KLL GVTIA GGVLPNI VLLPKK Sbjct: 24 QFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 119
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 4.812e-28 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ R L+KG Y++RVG+GAP GNAARDNKK +IIPRH+QLAVRNDEEL KLL GVTIA GGVLPNI VLLPKKT Sbjct: 25 QFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A2B_HUMAN (Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 4.812e-28 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ R L+KG Y++RVG+GAP GNAARDNKK +IIPRH+QLAVRNDEEL KLL GVTIA GGVLPNI VLLPKKT Sbjct: 25 QFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A1_XENLA (Histone H2A type 1 OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.812e-28 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ R L+KG Y++RVG+GAP GNAARDNKK +IIPRH+QLAVRNDEEL KLL GVTIA GGVLPNI VLLPKKT Sbjct: 25 QFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKT 121
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 6.285e-28 Identity = 63/97 (64.95%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGR+ R L+KG Y+QRVG+GAP GNAARDNKK +I PRH+QLAVRNDEEL KLL GVTIA GGVLPNI VLLPKKT Sbjct: 26 QFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKT 122
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2AX_MOUSE (Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 8.208e-28 Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNERV 306 QFPVGR+ R L+KG Y++RVG+GAP GNAARDNKK +IIPRH+QLA+RNDEEL KLL GVTIA GGVLPNI VLLPKK++ V Sbjct: 25 QFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSATV 125 The following BLAST results are available for this feature:
BLAST of CK933242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933242 ID=CK933242; Name=CK933242; organism=Citrus sinensis; type=EST; length=557bpback to top |