CK933253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 7.404e-47 Identity = 111/227 (48.90%), Postives = 148/227 (65.20%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 737 LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ + S M K LERY++ +Y A + +SA + + EY KLKA+ E +Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 9.670e-47 Identity = 119/249 (47.79%), Postives = 156/249 (62.65%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL-MEGYQVNTLQ---LNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQPADPISVVTAGPSLN--------NYMQGWL 770 +KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S + T+ERY +C Y N E + S QE KLK++YE+L R+ RNLLGE+LG + KEL++LERQL+ +L R +TQ M++ + +L+ KE+ L + NK LK + EG+ T Q N +A G P + + L+C EP LQIG+Q V G S++ N++QGW+ Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQ-SWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQ--QHYYVQGEGSSVSKSNVAGETNFVQGWV 251
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.069e-45 Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 737 LKRIEN INRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS +GKLY++ + S M K LERY++ +Y A + +SA + + EY KLKA+ E +Q+ Q++L+GE+L LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 8 LKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.182e-44 Identity = 103/231 (44.59%), Postives = 152/231 (65.80%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYG-----APEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD---TFFHALECEPTLQIG--YQPADPISV 725 LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S M K LERY++ +Y APE +V+ ++ EY +LKA+ E L+R+QR+ LGE+L ++SKEL++LE+QLD +LK IRS + Q M D++ ELQ KE+ + E N L +++ E ++ Q ++ G+ + P P + + + P L +G YQ DP+ + Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM------EYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEM 232
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 5.867e-44 Identity = 94/168 (55.95%), Postives = 127/168 (75.60%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 569 LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ + S M K LERY++ +Y A + +SA E + EY KLKA+ E +Q+ ++L+GE+L LN KEL+ LE+QL+ SLK I S ++ ML++++ELQ KE+ L E NK L++ L+E Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSY-AEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 2.229e-43 Identity = 107/235 (45.53%), Postives = 148/235 (62.98%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYG-----APEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL------KQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFH------ALECEPTLQIG--YQPAD 713 LKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS++GKL+E+ S S M K LERY++ +Y AP+ +V+A + + EY +LKA+ E L+R+QR+ LGEEL P++ K+L++LE+QL+ +LK IRS + Q M ++L LQ KE+ + E N L ++ ++ Q QLN S +D PQ F H A + P L +G YQ D Sbjct: 8 LKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNA----QTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDV--------PQPQPFQHPHLYMIAHQTSPFLNMGGLYQEED 230
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 4.967e-43 Identity = 100/233 (42.92%), Postives = 152/233 (65.24%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYG-----APEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD-----TFFHALECEPTLQIG--YQPADPISV 725 LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S M K LERY++ +Y APE +V+ ++ EY +LKA+ E L+R+QR+ LGE+L ++ KEL++LE+QLD +LK IR+ + Q M +++ ELQ KE+ + E N L +++ E ++ Q ++ G+ + P P + + + P L +G YQ DP+++ Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM------EYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAM 234
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.106e-42 Identity = 96/186 (51.61%), Postives = 129/186 (69.35%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNY---GAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 614 L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S SSM LERYQ+ ++ EPN +E + EY LK++ +ALQ+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ + + N +N + E+ Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.106e-42 Identity = 96/186 (51.61%), Postives = 129/186 (69.35%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNY---GAPEPNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 614 L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S SSM LERYQ+ ++ EPN +E + EY LK++ +ALQ+SQR LLGE+L L KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ + + N +N + E+ Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189
BLAST of CK933253 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.307e-40 Identity = 93/197 (47.21%), Postives = 132/197 (67.01%), Query Frame = 3 Query: 66 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPE---PNVSAREALELSSRQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQ 647 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFS++GKL+E+ + S M K LERY + Y + ++S E L E+ KLKAR E L++++RN +GE+L L+ KEL+SLE QL ++K IRS + Q M ++++ LQ K+++L + N L +++ E + NT+ C QPQ Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE-REKNTVHQEVQLIQCSNNSSILQPQ 199 The following BLAST results are available for this feature:
BLAST of CK933253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933253 ID=CK933253; Name=CK933253; organism=Citrus sinensis; type=EST; length=829bpback to top |