CK933254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.057e-57 Identity = 111/244 (45.49%), Postives = 155/244 (63.52%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGGF 902 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY++ EL+E+ + G M+P + +E DENTI V G T TG +E + HD L K + G D +H+DAASGGF Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGF 249
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.180e-56 Identity = 114/250 (45.60%), Postives = 162/250 (64.80%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGGF 902 M + +T+ + ++AS I ++ + + S E +I DEL+LDGN + NLA+F T ++ E L+ I+KN +D DEYP T E+++RCV+++A L+N+P + + +G T GSSEA ML G+A K +W++ RK+QGKP+DKPNIVTG VQ+CW KFA YF+ EL+EV +E Y+M P +A++ DENTI V LG T T ++EDVK + L K +E G D PIHVDAASGGF Sbjct: 1 MSLHHVKTNKYKGFYDSYASPPATKEISKYSLKEESNKPEVIRDLIIDELLLDGNAKQNLATFCQTDLDKEIHVLMDKCIDKNMIDKDEYPQTAEIESRCVHILADLWNSPESSE--TIGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELREVPMEHDRYIMTPEEAIKRCDENTIGVIPTLGVTFTLQYEDVKGISEALDKFEKETGLDIPIHVDAASGGF 247
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 1.542e-56 Identity = 110/244 (45.08%), Postives = 155/244 (63.52%), Query Frame = 3 Query: 174 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGGF 902 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP +KPN+V G VQ+CW KFARY++ EL+E+ + G M+P + +E DENTI V G T TG +E + HD L K + G D +H+DAASGGF Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGF 249
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.105e-54 Identity = 110/242 (45.45%), Postives = 152/242 (62.81%), Query Frame = 3 Query: 177 DSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGGF 902 D + L + I +FK+ D+ E ++I DEL+LDGN + NLA+F T ++ ++ I+KN +D DEYP + E++NRC++++A L+N P D +G T GSSEA ML GLA K W++ RK+ G PYDKPNIVTG VQ+CW KFA YF+ E++E+ +E G YVMN + ++ VDENTI V LG T T ++EDV + L K +E G + PIHVDAASGGF Sbjct: 7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIREIPMENGRYVMNSEEVLKRVDENTIGVIPTLGVTFTLQYEDVFSISNALDKFEKESGINIPIHVDAASGGF 245
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 7.918e-53 Identity = 103/251 (41.04%), Postives = 158/251 (62.95%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGG 899 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y++ E++EV ++ + +N K ++ VDE TI V I+G T TG ++D+K +L+ + N++ + IHVDAASGG Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGG 249
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.918e-53 Identity = 103/251 (41.04%), Postives = 159/251 (63.35%), Query Frame = 3 Query: 153 MVISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGG 899 M+ D E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L+N ++ + +G T+GSSEA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y++ E++EV +++ + +N K ++ VDE TI V I+G T TG ++D+K +L+ + N++ + IHVDAASGG Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGG 249
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.446e-46 Identity = 98/227 (43.17%), Postives = 141/227 (62.11%), Query Frame = 3 Query: 237 RFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEAELKEVKL-EEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTK-KNEEXGW---DTPIHVDAASGGF 902 ++ +P +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ ++ KN D DEYP EL RC++M+A L++ D+ +G T GSSEAIML GLA K++W+ + K GK KPNI+ + QV EKF RYFE E + V + +++++P + VDENTI ILG+T TG E+V+ D+L++ + + W D PIH D ASGGF Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWH--ANPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGF 283
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.467e-46 Identity = 94/233 (40.34%), Postives = 143/233 (61.37%), Query Frame = 3 Query: 204 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASG 896 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+ME E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P D + +G TVGSSEA ML GLA K +W+ +++G +PN++ + QVCWEKF Y++ +++ V +++ + ++ K +LVDE TI V ILG T TG+F+D++L + + NE IH+D ASG Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KDMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLDEKVEAYNETNEHQLVIHIDGASG 249
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.178e-46 Identity = 94/247 (38.06%), Postives = 149/247 (60.32%), Query Frame = 3 Query: 168 TETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY--DKPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASGGF 902 ++ + L F S IP++ + + AY+++ DEL+ +G+ R NLA+F T+ME E KL+ ++ KN +D EYP T EL+NRCVN+IA L++ P D+ +G T+GSSEA ML G+A K W+++ ++ G KPN+V + QVCWEKF Y++ +++ V +++ + +N + ++ VDE TI V ILG T TG ++D+ ++ L + N + + IHVDAASGGF Sbjct: 4 SKENKESYLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAP--KDQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGF 248
BLAST of CK933254 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 9.375e-46 Identity = 93/233 (39.91%), Postives = 142/233 (60.94%), Query Frame = 3 Query: 204 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFEAELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLSHDLLTKKNEEXGWDTPIHVDAASG 896 F S +IP++ + M AYQ++ D+LM +GN R NLA+F T+ME E + L+ ++ KN +D EYP T EL+NRCVN++A L+N P + + +G TVGSSEA ML GLA K +W+ +++G +PN++ + QVCWEKF Y++ +++ V +++ + ++ K ELVDE TI + ILG T TG+F+D+ L + + NE IH+D ASG Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAP--KEMSYLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILGITYTGKFDDIALLDEKVEAYNEANEHQLVIHIDGASG 249 The following BLAST results are available for this feature:
BLAST of CK933254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933254 ID=CK933254; Name=CK933254; organism=Citrus sinensis; type=EST; length=904bpback to top |