CK933264

Overview
NameCK933264
Unique NameCK933264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_HELVI (60S ribosomal protein L31 OS=Heliothis virescens GN=RpL31 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25
Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVID 416
            E+ GK    EVVTREYT+NLHKRLHG  FKK+AP+AIKEIRKFA+K M T DVRVD +LNK +WS                  ND+ED+  + ++LVT   +P   +KGL T+ +D
Sbjct:    7 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_XENLA (60S ribosomal protein L31 OS=Xenopus laevis GN=rpl31 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 57/117 (48.72%), Postives = 74/117 (63.25%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K MRT DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    KGL T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTNYKGLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_ICTPU (60S ribosomal protein L31 OS=Ictalurus punctatus GN=rpl31 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 57/117 (48.72%), Postives = 74/117 (63.25%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG +FKK+AP+AIKEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    KGL T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTYKGLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_PAROL (60S ribosomal protein L31 OS=Paralichthys olivaceus GN=rpl31 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.008e-23
Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+AIKEIRKFA K M T DVR+D +LNK VWS                  N++ED+  + Y+LVT   +P    KGL T  +DE
Sbjct:    9 KKKGRSAINEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDVRIDTRLNKAVWSKGVRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTCKGLQTVNVDE 123          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_RAT (60S ribosomal protein L31 OS=Rattus norvegicus GN=Rpl31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_PIG (60S ribosomal protein L31 OS=Sus scrofa GN=RPL31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_MOUSE (60S ribosomal protein L31 OS=Mus musculus GN=Rpl31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_MARMO (60S ribosomal protein L31 OS=Marmota monax GN=RPL31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_HUMAN (60S ribosomal protein L31 OS=Homo sapiens GN=RPL31 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
BLAST of CK933264 vs. ExPASy Swiss-Prot
Match: RL31_BOVIN (60S ribosomal protein L31 OS=Bos taurus GN=RPL31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 3
Query:   69 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMRTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPSEGLKGLGTKVIDE 419
            +K G+    EVVTREYTIN+HKR+HG  FKK+AP+A+KEIRKFA K M T DVR+D +LNK VW+                  N++ED+  + Y+LVT   +P    K L T  +DE
Sbjct:   10 KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTVNVDE 124          
The following BLAST results are available for this feature:
BLAST of CK933264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_HELVI5.344e-2550.8660S ribosomal protein L31 OS=Heliothis virescens G... [more]
RL31_XENLA2.652e-2448.7260S ribosomal protein L31 OS=Xenopus laevis GN=rpl... [more]
RL31_ICTPU5.909e-2448.7260S ribosomal protein L31 OS=Ictalurus punctatus G... [more]
RL31_PAROL1.008e-2349.5760S ribosomal protein L31 OS=Paralichthys olivaceu... [more]
RL31_RAT6.533e-2347.0160S ribosomal protein L31 OS=Rattus norvegicus GN=... [more]
RL31_PIG6.533e-2347.0160S ribosomal protein L31 OS=Sus scrofa GN=RPL31 P... [more]
RL31_MOUSE6.533e-2347.0160S ribosomal protein L31 OS=Mus musculus GN=Rpl31... [more]
RL31_MARMO6.533e-2347.0160S ribosomal protein L31 OS=Marmota monax GN=RPL3... [more]
RL31_HUMAN6.533e-2347.0160S ribosomal protein L31 OS=Homo sapiens GN=RPL31... [more]
RL31_BOVIN6.533e-2347.0160S ribosomal protein L31 OS=Bos taurus GN=RPL31 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933264 ID=CK933264; Name=CK933264; organism=Citrus sinensis; type=EST; length=658bp
GGGGAGCAGCCGCAGACTCAGAGTGTAGAAGCTCGAGAGCAGAAAAAGAA
GAAGCAACAACAATGGTGGAGAAAGCTGGTAAAGGAAGAAAAGAAGAGGT
CGTCACTCGCGAATATACCATTAATCTCCACAAACGCTTGCATGGCTGCA
CCTTCAAGAAGAAAGCTCCAAAAGCCATAAAGGAAATTAGGAAGTTTGCT
CAAAAAGCCATGCGGACAACTGATGTTAGGGTGGATGTGAAGCTCAACAA
GCAAGTGTGGAGCCGTGGTATCCGTAGTGTACCAAGGAGAATTCGTGTTC
GCGTTGCACGGAAGAGAAACGATGAGGAAGATGCCAAAGAAGAGTTCTAC
TCTCTCGTCACTGTTGCCGAGATCCCTTCAGAAGGACTCAAGGGGTTGGG
CACCAAGGTCATTGATGAGGAAGATTGAAGCAACCTTTCTGTTTAGCTAA
GGAACTCCAAATTTTGGCTATAATTTTATCTTATTCAGTTGCTCTTTTGG
TTTTGGATTTACTTTTTAGAACTGCCTTGGGCCAAAAAAGGTTTCGTGAA
CGTATTGTGTTTTATGCATTTACCCTGTTTAAGATTTCTGATACTTCATT
CATTCACGCACGGATATGTTTTTATTTTCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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