CK933275

Overview
NameCK933275
Unique NameCK933275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  408 EGTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 599
            E ++   YRGVR+RPWG++AAEIRDP K  RVWLG+F T            ++F+G+KA  NFP
Sbjct:   46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 3
Query:  429 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            YRGVR R WGKW +EIR+P+K +R+WLGTF T            L  KGT A LNFPE
Sbjct:   51 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPE 108          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 3
Query:  429 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            YRGVRQR WGKW AEIR P+  AR+WLGTF+T             K +G  A LNFPE
Sbjct:  143 YRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFPE 200          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 33/61 (54.10%), Postives = 38/61 (62.30%), Query Frame = 3
Query:  429 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 611
            YRGVRQR WGKW AEIR PK   R+WLGTFET             K +G  A+LNFP+ V+
Sbjct:  111 YRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVR 171          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3
Query:  414 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            ++  ++RGVR R WGKW +EIR+PKK +R+WLGTF T            L  KG  A LNFPE
Sbjct:   40 SKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 102          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 3
Query:  411 GTRRRH---YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTT 620
            GTR+R    Y+G+R R WGKW AEIR+P K +R+WLG++ T               +G  A+LNFPE + G T
Sbjct:   19 GTRKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAGLT 91          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 31/58 (53.45%), Postives = 36/58 (62.07%), Query Frame = 3
Query:  429 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            YRGVRQR WGKW AEIR P+   R+WLGTF+T             K +G  A+LNFPE
Sbjct:  187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPE 244          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 31/64 (48.44%), Postives = 39/64 (60.94%), Query Frame = 3
Query:  411 GTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            G +   YRGVR R WGKW +EIR+P+K +R+WLGT+ T            L  KGT A LNFP+
Sbjct:   94 GDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPK 157          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 3
Query:  429 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNF 596
            YRGVR+RPWG++AAEIRDP K  RVWLGTF+T              F+G KAK NF
Sbjct:   31 YRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86          
BLAST of CK933275 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.855e-11
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 3
Query:  414 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 602
            +++ ++RGVR R WGKW +EIR+P+K +R+WLGTF T            L  KG  A LNFPE
Sbjct:   35 SKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPE 97          
The following BLAST results are available for this feature:
BLAST of CK933275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ERF77_ARATH4.882e-1250.00Ethylene-responsive transcription factor 10 OS=Ara... [more]
DREB3_ARATH6.376e-1255.17Dehydration-responsive element-binding protein 3 O... [more]
ERF54_ARATH8.327e-1255.17Ethylene-responsive transcription factor ERF054 OS... [more]
ERF57_ARATH1.088e-1154.10Ethylene-responsive transcription factor ERF057 OS... [more]
ERF38_ARATH1.088e-1149.21Ethylene-responsive transcription factor ERF038 OS... [more]
ERF08_ARATH1.088e-1143.84Ethylene-responsive transcription factor ERF008 OS... [more]
ERF53_ARATH1.420e-1153.45Ethylene-responsive transcription factor ERF053 OS... [more]
ERF34_ARATH1.420e-1148.44Ethylene-responsive transcription factor ERF034 OS... [more]
ERF79_ARATH1.855e-1157.14Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF39_ARATH1.855e-1147.62Ethylene-responsive transcription factor ERF039 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_D11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933275 ID=CK933275; Name=CK933275; organism=Citrus sinensis; type=EST; length=871bp
GGGGCTCCCATTCAATCCTCAACTTCCATGTCTACAGGTCTGTTAACAAA
ACCAAACAAAACAATTACTTTTTCCGTTGTATGTAATAAAATCCAATAAA
AAAATTATTGCATTACATTAGAGTTTATAGAAGTGCTTATTGTAACCGCA
GAAAAGTGGATCATCGAAGGCATGGAAAGCGGCCACTTCCACTGGAAGCA
TCACCGGAGGAGAAAGAGAAAGAACAAGACAACAACTTCCCTGCTTGGAC
TACTCATGAATCAGACATGTCTGCCATGGTTTCCGCTCTTACACAAGTAA
TTGGCACCACTACCACCGACGCCGACGCCGACCCCTCGCCGGCAGCCGTT
AAAGAAGAATCCTCCGATAACCCACTTCAACAAACTCAAACTCAAGATCA
AGATCAAGAAGGTACAAGGAGGAGACATTACAGAGGAGTAAGACAAAGAC
CTTGGGGCAAATGGGCAGCCGAAATTAGAGACCCTAAAAAGGCAGCACGA
GTATGGCTAGGTACATTTGAGACTGCTGAAGATGCAGCCATGGCTTATGA
TAAAGCTGCCCTCAAATTCAAAGGCACCAAAGCTAAGCTTAATTTCCCTG
AAAGAGTTCAGGGTACTACTGAGTTTGTGTATTTAGATTCATCATCATCA
AGCTCTGCCTTTCATCATCATCATGAATCGGTGATGCCTGCTCCTCCTCC
TAGGCCTACATCAATGCACCATGGTGCATACCCGGACTTGCTTCAATATG
CTCAAATTCTATCTTCTGATGATGCTACTTTTAATTACTATACGTCCAAT
CTCTTTAATCCACAATCATCATCTTGTTCTTCTTCTACTCCTTCGACGTT
TTCATCATCTACCACCTCATT
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