CK933295

Overview
NameCK933295
Unique NameCK933295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933295 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 4.541e-88
Identity = 162/279 (58.06%), Postives = 203/279 (72.76%), Query Frame = 1
Query:   82 TRVYSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLDSLQHVLRKAEEYLTTVVPETPFSGLALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFKCVILT 912
            TRV S+R+R+ +TLSAHRNE+++LLSR   +GKGILQ H LI E ++I  E+     L  G FG+++ + QEAIVLPP+VA+AVRPRPGVWEY+RVNV            YL FKEELV+G SN N +LELD EPFNASFPRPT S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLRVH +KG  +MLNDRIQ++  LQ  L KAE++L+ + P+T +S      Q  G ERGWGDTA R LEM+       +APDP TLETFLGR+PMVF  VIL+
Sbjct:    8 TRVPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGTGFERGWGDTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILS 286          
BLAST of CK933295 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.732e-74
Identity = 137/222 (61.71%), Postives = 165/222 (74.32%), Query Frame = 1
Query:  247 LTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLDSLQHVLRKAEEYLTTVVPETPFSGLALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFKCVILT 912
            L++G F EVLR+ QEAIV+PP+VA+AVRPRPGVWEY+RVNV            YLHFKEELVDG ++ ++VLELDFEPFN S PRPT S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLRVH HKG  MMLNDRIQ +  LQ  L KAE+YL  +  +TP+S      Q +G ERGWGDTAER LEM+       +APDP TLETFLGR+PMVF  VIL+
Sbjct:    7 LSDGPFSEVLRSAQEAIVVPPFVAIAVRPRPGVWEYVRVNVSELNVEQLTVSEYLHFKEELVDGKADDHYVLELDFEPFNESVPRPTRSSSIGNGVQFLNRHLSSSMFCNKDCLEPLLDFLRVHKHKGVVMMLNDRIQTIQRLQSALSKAEDYLIKLPADTPYSEFEFVIQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRLPMVFNVVILS 228          
BLAST of CK933295 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 6.366e-74
Identity = 146/255 (57.25%), Postives = 182/255 (71.37%), Query Frame = 1
Query:  154 LSRIEGKGKGILQNHQLIAEF-ESISEENR-KHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLDSLQHVLRKAEEYLTTVVPETPFSGLALRFQEIGLERGWGDTAERALEMIQXXXXXXEAPDPCTLETFLGRIPMVFKCVILT 912
            L R   +GKGILQ+HQLI EF +++  +   + L +  F +VL   QEAIVLPP+VALA+RPRPGV EY+RVNV+           YL FKEELV+G +NG+++LELDFEPFNA+ PRPT S SIGNGV+FLNRHLS+ +F +KESM PLLEFLR H H G+ MMLNDRIQN+  LQ  L +AEE+L+ +   TP+S      Q +G ERGWGDTA++  EM+       +APDP  LETFLGRIPMVF  VIL+
Sbjct:   29 LVRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKSPFMKVL---QEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNGHANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTHKHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQKVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILS 280          
The following BLAST results are available for this feature:
BLAST of CK933295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_PEA4.541e-8858.06Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU3.732e-7461.71Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS2_ARATH6.366e-7457.25Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_C06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933295 ID=CK933295; Name=CK933295; organism=Citrus sinensis; type=EST; length=914bp
GGGATTCCCATTCTCTTCATTCTGTTTTTCCCGTCCTTGAAGTTTTTGTT
TGTCTGAGAATCAATGGCCGAACGTGCTTTGACCCGCGTTTACAGTCTCC
GCGAGCGTTTGGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGCC
CTTTTGTCAAGGATTGAGGGCAAGGGCAAAGGAATCTTGCAAAACCATCA
ACTTATTGCTGAGTTTGAATCAATTTCTGAGGAAAACAGAAAGCATCTAA
CTGAGGGTGCATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGTT
TTGCCTCCGTGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGGA
GTACATCCGAGTGAATGTCCATGCCCTTGTCGTTGAGGAGCTGCTTGTAG
CCGAGTACCTGCACTTCAAGGAGGAACTTGTCGATGGAGGCTCCAATGGC
AACTTCGTGCTTGAGTTGGATTTTGAGCCATTCAATGCCTCGTTCCCTCG
CCCAACTCTTTCAAAGTCTATTGGAAATGGTGTGGAATTCCTTAACCGCC
ACCTTTCTGCGAAGCTCTTCCATGACAAGGAGAGCATGCATCCACTGCTT
GAATTTCTCCGCGTCCACTGCCACAAGGGCAAAAACATGATGCTGAATGA
CAGAATTCAGAACTTGGATTCTCTTCAACATGTTCTGAGGAAGGCAGAGG
AGTATCTGACCACAGTGGTACCAGAAACGCCATTCTCTGGGTTGGCACTA
AGATTTCAGGAGATTGGTTTGGAGAGAGGTTGGGGTGATACTGCTGAGCG
TGCACTTGAGATGATTCAGCTTCTTTTGGATCTTCTTGAGGCACCTGATC
CGTGCACTCTTGAGACTTTCCTTGGCAGAATCCCCATGGTCTTTAAATGT
GTGATCCTTACTCC
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