CK933374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933374 vs. ExPASy Swiss-Prot
Match: EIF3E_CHAGB (Eukaryotic translation initiation factor 3 subunit E OS=Chaetomium globosum GN=INT6 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.174e-43 Identity = 93/265 (35.09%), Postives = 155/265 (58.49%), Query Frame = 3 Query: 51 NFNATMATYDLTQRIAPNLDRHLVFPLLEFL------QERQMYPDE----QILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQXEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDFCHQDKYLNAIQPMLP 815 N +A ++ YDL ++A NLDRH++FPLLEF +E + DE +I ++K LL +NM DY +++ L E+ P + +++ +V ++L+ LE++ + I+ L+ + +LR+ D+ NL+ L +Q+ D AL+ Q+ CGNY A++ LY++R L T++++ A WG++A EIL NW+ A+EEL +++E + D K +PL Q+Q R L HW+LF FN + R I++ Y+N IQ P Sbjct: 8 NGDAAVSDYDLMLKLAQNLDRHMIFPLLEFSAGQLVDEESGVVRDEAKAREITQAKYSLLKNSNMTDYVANLYCELAGVEEPPAEFADKKQKVFSQLQNLEQQTSKIIELLEREDVVNNLRS-DKVANLEFLKREHQVTMDMVNALFDLGNLQYSCGNYGDASEMLYRFRVLSTDNDKVAFATWGRLACEILTMNWESAMEELVKVRETI-DTKLSQNPLAQLQHRTALTHWALFPLFNFEKAREPILELFFNAGYINTIQANCP 270
BLAST of CK933374 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEEL (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis elegans GN=eif-3.E PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.193e-41 Identity = 90/257 (35.02%), Postives = 157/257 (61.09%), Query Frame = 3 Query: 66 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYN-----LQMLNDRYQIGPDQXEALYQYAKFQFECGNYSGAADYLYQYRALCTNSE-RRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIID-FCHQDKYLNAIQPMLP 815 M+T+DLTQR+AP LD HL+ PLLEF++ R +Y ++ + + +LL KTNM+D ++ Y+ + +P + ++ +++ L+ + +V+ L+ P +++ N++ + L+ L + D + L++Y+KF +ECGNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ + D F + + R WLMHW+LF+++N+ GR II+ F +Q YLNAIQ + P Sbjct: 1 MSTFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIE----TYNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIP-EVKEMMDNNRERDGNVRILEHLTQNHNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYI-DANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLAP 251
BLAST of CK933374 vs. ExPASy Swiss-Prot
Match: EIF3E_MONBE (Eukaryotic translation initiation factor 3 subunit E OS=Monosiga brevicollis GN=13685 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.574e-36 Identity = 83/251 (33.07%), Postives = 140/251 (55.78%), Query Frame = 3 Query: 66 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLNDRYQIGPDQXEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIID-FCHQDKYLNAIQPMLP 815 MA +DLTQ I NLD HL+ PLL+ + +Y + + ++K+++L++T +++ A+++ + TE +D+ R + K E++ P+ +N + A +L + Y + + LY +KF F+ G Y A LY YRA+ T+ + + +ALWGK+AA IL NW A E++ L E +D K+ + + Q+Q R WL+HWSLF+FFN +G I+D F +++ NA+Q + P Sbjct: 1 MAAHDLTQAICQNLDPHLILPLLDHCVDLDIYNEADLKRAKMQVLSRTRLIEQALELADA---TEK--KDLDARMRSISEEEKTWEKQLEPVFEMFENDEVLSIIEATKNKDSLLSELEPYGFTENTADLLYHGSKFYFDRGQYDLAHGLLYNYRAVSTDDKLKFTALWGKLAAAILSGNWQTAQEDMYLLLEYIDGGKNELTAVEQLQQRNWLLHWSLFVFFNQPDGPDGIVDLFMNKETCTNAMQTIAP 246
BLAST of CK933374 vs. ExPASy Swiss-Prot
Match: EIF3E_DICDI (Eukaryotic translation initiation factor 3 subunit E OS=Dictyostelium discoideum GN=eif3e PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 77/294 (26.19%), Postives = 150/294 (51.02%), Query Frame = 3 Query: 75 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFL----QNPNSFQDLRANDQHYNLQMLNDRY----------------------------------------QIGPDQXEALYQYAKFQFECGNYSGAADYLYQYRALCT---NSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDFCHQDKYLNAIQPMLP 815 YDLT++I LD H++ PL+ +L++ Q Y + +I K+ ++L++T DYA++ ++S+ + P + ++ E+V L L+E+ + + ++ Q ++L+ + + D+ +I P+ +++Y+++K FE G Y A ++L + L N ++RLSALWG + ++IL NW A+ +++ L++++D S +P+ Q+ R WL+H +LF++F + R+ ++D +DKYLNAIQ P Sbjct: 3 YDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESIGR-DTAP--LQAKKQELVGELNKLKEQCSFVTQYIESKKQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHLEIFLQLSPTHQNKDKRLSALWGILESDILSLNWGQAVGDISPLQDQID---SNGTPVEQLGQRAWLIHRALFVYFYNPESRSSLVDLLLEDKYLNAIQTTCP 290
BLAST of CK933374 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEBR (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis briggsae GN=eif-3.E PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.263e-23 Identity = 54/127 (42.52%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 441 DQXEALYQYAKFQFECGNYSGAADYLYQYRALCTNSE-RRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIID-FCHQDKYLNAIQPMLP 815 D + L++Y+KF +ECGNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ + D F + + R WLMHW+LF+++N+ GR II+ F +Q YLNAIQ + P Sbjct: 5 DMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYI-DANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLAP 130 The following BLAST results are available for this feature:
BLAST of CK933374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933374 ID=CK933374; Name=CK933374; organism=Citrus sinensis; type=EST; length=817bpback to top |