CK933378

Overview
NameCK933378
Unique NameCK933378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_HYPNO (60S ribosomal protein L15 OS=Hypophthalmichthys nobilis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 6.508e-58
Identity = 84/133 (63.16%), Postives = 94/133 (70.68%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQS+VMRFL RVRCW+YRQ  S+ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 74.3294 bits (181), Expect = 6.508e-58
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 1.442e-57
Identity = 82/133 (61.65%), Postives = 91/133 (68.42%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ   + R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G LRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 76.6406 bits (187), Expect = 1.442e-57
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            P H A+R DP   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:  137 PFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_MEGAM (60S ribosomal protein L15 OS=Megalobrama amblycephala GN=rpl15 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.880e-57
Identity = 83/133 (62.41%), Postives = 94/133 (70.68%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ +LWRKKQS+VMRFL RVRCW+YRQ  S+ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYKYMQKLWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 74.3294 bits (181), Expect = 1.880e-57
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.880e-57
Identity = 82/133 (61.65%), Postives = 94/133 (70.68%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEV+
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVV 133

HSP 2 Score: 74.3294 bits (181), Expect = 1.880e-57
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.880e-57
Identity = 82/133 (61.65%), Postives = 94/133 (70.68%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEV+
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVV 133

HSP 2 Score: 74.3294 bits (181), Expect = 1.880e-57
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_SINKN (60S ribosomal protein L15 OS=Siniperca kneri GN=rpl15 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 1.880e-57
Identity = 82/133 (61.65%), Postives = 92/133 (69.17%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G LRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 75.8702 bits (185), Expect = 1.880e-57
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            P H A+R +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  137 PFHKAVRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_SILAS (60S ribosomal protein L15 OS=Silurus asotus GN=rpl15 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.196e-57
Identity = 83/133 (62.41%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  R TRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +S+AEERAGR  GGLRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRATRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 73.9442 bits (180), Expect = 3.196e-57
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P + W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:  139 HKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 4.167e-57
Identity = 83/133 (62.41%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGA  ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +S+AEERAGR  GGLRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGASKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 73.9442 bits (180), Expect = 4.167e-57
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P + W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:  139 HKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 5.433e-57
Identity = 84/133 (63.16%), Postives = 94/133 (70.68%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQS+VMRFL RVRCW+YRQ  S+ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 71.2478 bits (173), Expect = 5.433e-57
Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   V KHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
[Close]
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.433e-57
Identity = 82/133 (61.65%), Postives = 92/133 (69.17%), Query Frame = 3 
Query:   75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G LRVLNSYW+ EDSTYK+FEVI
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133

HSP 2 Score: 74.3294 bits (181), Expect = 5.433e-57
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = 2 
Query:  488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664
            H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:  139 HKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197
The following BLAST results are available for this feature:
BLAST of CK933378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_HYPNO6.508e-5863.1660S ribosomal protein L15 OS=Hypophthalmichthys no... [more]
RL15_ANGJA1.442e-5761.6560S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_MEGAM1.880e-5762.4160S ribosomal protein L15 OS=Megalobrama amblyceph... [more]
RL15_HYDAT1.880e-5761.6560S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_CARAU1.880e-5761.6560S ribosomal protein L15 OS=Carassius auratus GN=... [more]
RL15_SINKN1.880e-5761.6560S ribosomal protein L15 OS=Siniperca kneri GN=rp... [more]
RL15_SILAS3.196e-5762.4160S ribosomal protein L15 OS=Silurus asotus GN=rpl... [more]
RL15_SILME4.167e-5762.4160S ribosomal protein L15 OS=Silurus meridionalis ... [more]
RL15_HYPMO5.433e-5763.1660S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_EPICO5.433e-5761.6560S ribosomal protein L15 OS=Epinephelus coioides ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004286_B12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933378 ID=CK933378; Name=CK933378; organism=Citrus sinensis; type=EST; length=883bp
GGGGATAGCTCTCTCATTGTAAGCGAAAACCCTAGACGCACGGATACTGC
GCATCTCAGCTCAGCTCAGAGCCAATGGGGGCTTACACGTTCGTGTCGGA
GCTATGGAGGAAGAAGCAGTCAGATGTGATGAGGTTCTTGCAGAGGGTGA
GGTGTTGGGAGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTCCC
ACTCGACCTGACAAGGCTCGACGCTTGGGTTACAAGGCCAAGCAGGGTTA
TGTTGTTTATCGTGTGCGGGTAAGGCGCGGTGGTCGGAAGAGGCCTGTTC
CCAAGGGCATTGTGTATGGTAAACCCACAAACCAGGGTGTTACTCAACTG
AAGTTTCAGCGCAGCAAGAGGTCTGTTGCAGAGGAGCGTGCCGGTCGTAA
GTTGGGAGGTCTTAGGGTTCTCAATTCTTACTGGATCAATGAGGACTCCA
CTTATAAGTACTTTGAGGTGATTTGGTTGATCCTGCTCATAATGCCATCC
GTAATGACCCAAGAATTAATTGGTTATGCAATCCTGTCCATAAGCACAGG
GAACTCCGTGGTCTTACTTCTGCAGGTAAGAAGTACAGAGGCCTACGTGG
AAAAGGACACTTGCACCACAAGGCTCGGCCTTCGCGCAGGGCTACCTGGA
AGAGAAACAATACTCTTTCCCTCCGTCGCTACCGTTGATCATTGTTACGG
TTTTGATGTTTATCATCAGTTGAGGGATTTTGTCTGGAGGACATAGTAGT
TGCCATTTTGAGTCTTTTAGAGATTGAAATACTATGGAACATATCTTATT
TTGAAACCGTACATTCTAAATTAAGACATTTGTGTTTCTTGAGTNCAAAA
AAAAAAGAAAAAAAAAAAAAAAAAAANNNNNNA
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