CK933378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 6.507e-42 Identity = 57/93 (61.29%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 195 RPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 RPTRPDKARRLGYKAKQ YGKP + GV QLKF RS +SVAEERAGR G LRVLNSYW+ EDSTYK+FEVI Sbjct: 2 RPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 94 HSP 2 Score: 79.337 bits (194), Expect = 6.507e-42 Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664 P H IR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 98 PFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 158
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.008e-35 Identity = 45/82 (54.88%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 228 GYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 GYKAKQ YGKP + GV QLKF RS +SV EERAGR G LRVLNSYW+ EDSTYK+FEVI Sbjct: 1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 82 HSP 2 Score: 81.2629 bits (199), Expect = 3.008e-35 Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 664 P H AIR +P W+ PVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R NT Sbjct: 86 PFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 146
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.722e-34 Identity = 72/123 (58.54%), Postives = 84/123 (68.29%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINE 443 MGAY +V+E+ R+KQSDV+RFL RVRCWEYRQ I R +RP+RPDKARRLGYKAKQ +GKP NQG+ QLKFQRS RS AEER R+ GGLR+LNSYWI + Sbjct: 1 MGAYKYVAEMERRKQSDVLRFLLRVRCWEYRQLNVIHRASRPSRPDKARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITK 123
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METJA (50S ribosomal protein L15e OS=Methanocaldococcus jannaschii GN=rpl15e PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.051e-33 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 MG Y ++ E W++ + +R L R ++R+ P++VR+ RPTR D+AR LGYK KQ KP GV ++ +S + +AEERA RK + VLNSYW+ ED +K++EVI Sbjct: 1 MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKN--SKKPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVI 131 HSP 2 Score: 68.5514 bits (166), Expect = 2.051e-33 Identity = 34/58 (58.62%), Postives = 39/58 (67.24%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 655 P H AI+ DP++NWLC H+ R RGLTSAGKK RGLR KG K RPS RA +R Sbjct: 135 PYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRR 192
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METM5 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl15e PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.884e-32 Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVIWLILLIMPSV 503 M Y +V E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA +K + VLNSYW+ +D K++EVI L+ PS+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVIRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKH--SKKPATMGINKITMAKSIQRIAEERAAKKYPNMEVLNSYWVGQDGKQKWYEVI-LVDPCQPSI 140 HSP 2 Score: 63.929 bits (154), Expect = 4.884e-32 Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 655 P +I+ND NWLC HK R RGLTSAGKK RGL KG KARPS RA K+ Sbjct: 135 PCQPSIKNDKSYNWLCKGTHKGRVTRGLTSAGKKGRGLMYKGKGAEKARPSVRANGKK 192
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_THEON (50S ribosomal protein L15e OS=Thermococcus onnurineus (strain NA1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.103e-31 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 MG Y ++ E W+ + + L + R ++R+ P +VRV RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKKRMIKWRREPVVVRVERPTRLDRARSLGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVI 131 HSP 2 Score: 62.7734 bits (151), Expect = 3.103e-31 Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 P H I++DP+I W+ HK R RGLTSAG+K RGLR KG K RPS RA Sbjct: 135 PHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGRKSRGLRNKGKGAEKVRPSVRA 188
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_THEGJ (50S ribosomal protein L15e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.103e-31 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 MG Y ++ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIKWRREPVVVRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVI 131 HSP 2 Score: 63.1586 bits (152), Expect = 3.103e-31 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 P H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 135 PHHPVIKSDPKIAWITGKAHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSVRA 188
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.040e-31 Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVIWLILLIMPSVMTQE 515 M Y +V E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVI L+ PS+ + + Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKH--SKKPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVI-LVDSCHPSIKSDK 144 HSP 2 Score: 60.8474 bits (146), Expect = 4.040e-31 Identity = 31/56 (55.36%), Postives = 35/56 (62.50%), Query Frame = 2 Query: 488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 655 H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 137 HPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.040e-31 Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVIWLILLIMPSVMTQE 515 M Y +V E W+ + ++ LQ R ++R+ PS++RV RPTR D+AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVI L+ PS+ + + Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWSRMQDWRKEPSVIRVERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKH--SKKPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVI-LVDSCHPSIKSDK 144 HSP 2 Score: 60.8474 bits (146), Expect = 4.040e-31 Identity = 31/56 (55.36%), Postives = 35/56 (62.50%), Query Frame = 2 Query: 488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 655 H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 137 HPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_PYRHO (50S ribosomal protein L15e OS=Pyrococcus horikoshii GN=rpl15e PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 6.852e-31 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 MG Y ++ E W+ + + L + R ++R+ PS+VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVI 131 HSP 2 Score: 60.8474 bits (146), Expect = 6.852e-31 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 P H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 135 PHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188 The following BLAST results are available for this feature:
BLAST of CK933378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933378 ID=CK933378; Name=CK933378; organism=Citrus sinensis; type=EST; length=883bpback to top |