CK933378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.474e-23 Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 81 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 AY+++ + W+ + L R E+R+ P++V++ RPTR D+AR LGYKAKQ K + G+ L + S + +AE RA RK + VLNSYW+ +D +K++E+I Sbjct: 5 AYSYIRDAWKNPSKTYVGELFWERLQEWRKEPTVVKIDRPTRLDRARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEII 133 HSP 2 Score: 48.9062 bits (115), Expect = 5.474e-23 Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 655 P H +I +D ++W+ H+ R RGLTSAGKK RG R KG K PS +A +R Sbjct: 137 PHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKGKGTEKNYPSVQAHDRR 194
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_SULAC (50S ribosomal protein L15e OS=Sulfolobus acidocaldarius GN=rpl15e PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 9.241e-23 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 + Y ++ + W+ K D R + R R E+R+ P+I R+ RPTR ++AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+EVI Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVI 131 HSP 2 Score: 45.8246 bits (107), Expect = 9.241e-23 Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2 Query: 485 AHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHKARPSRR 640 +H IR+DP + WL + V++ R RGLTSAG+K RGL RG KG + K + ++ Sbjct: 136 SHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGTVQRKWKKKQK 191
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.245e-23 Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 + Y ++ W ++ QR+ W R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+E++ Sbjct: 3 LSMYHYIENTWNSEEWKKSVLRQRLIKW--RKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIV 131 HSP 2 Score: 51.2174 bits (121), Expect = 9.245e-23 Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLR 598 P+H I++DP+ WL +P +++R RGLTSAGKK RGLR Sbjct: 135 PSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLR 173
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.269e-23 Identity = 47/132 (35.61%), Postives = 65/132 (49.24%), Query Frame = 3 Query: 84 YTFVSELW-RKKQSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 Y +V E W R +SDV L R++ W R+ S+ R+ RPTR D+AR LGYKAKQ + + G +S + +AEERA + + VLNSYW+ +D KY+EVI Sbjct: 6 YAYVREAWARPDKSDVKALLWDRMQVW--RREGSVTRIDRPTRIDRARALGYKAKQGIAVVRVHVRRGGRRASRY--VRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVI 133 HSP 2 Score: 54.299 bits (129), Expect = 9.269e-23 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 2 Query: 488 HNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 H +I++D + WL NP H+ R RG TSAG+K RG+R +G K RPS R+ Sbjct: 139 HPSIQSDKNLAWLANPTHRGRAERGKTSAGRKGRGMRTRGRGTEKTRPSIRS 190
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.206e-22 Identity = 46/131 (35.11%), Postives = 65/131 (49.62%), Query Frame = 3 Query: 84 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 Y +V + W+ + L+ R +R+ S+ R+ RPTR D+AR LGYKAKQ G+ T + G ++ S + +AE RA RK L VLNSYW+ ED +K+FEVI Sbjct: 6 YGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVI 133 HSP 2 Score: 51.2174 bits (121), Expect = 1.206e-22 Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 P H I++D +NW+C+ + R RG TSAG+K RG+ +G K RPS RA Sbjct: 137 PHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRA 190
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_THEVO (50S ribosomal protein L15e OS=Thermoplasma volcanium GN=rpl15e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.498e-22 Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 84 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 Y + E W+ + + +++ R +R PS+VR+ PTR D+AR LGYK+K I+ G+ P +L ++S + +AEERA K L VLNSY++ ED YKY+EVI Sbjct: 7 YQEIREEWKSLKKSEIYDVEKSRMIGWRHGPSVVRLDHPTRIDRARALGYKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRLAYNKLTRKKSLKLIAEERAADKYPNLEVLNSYYVGEDGLYKYYEVI 134 HSP 2 Score: 50.447 bits (119), Expect = 4.498e-22 Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 2 Query: 485 AHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 643 +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS RA Sbjct: 139 SHPNIYNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRA 191
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15_BRANA (60S ribosomal protein L15 (Fragment) OS=Brassica napus GN=RPL15 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.611e-19 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 129 MRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQ 245 MRF+QRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ Sbjct: 3 MRFVQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQ 41 HSP 2 Score: 36.5798 bits (83), Expect = 2.611e-19 Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 301 PRALCMVNPQTRVLLN*SFSAARGLLQRS 387 P+ LCMVNPQTR LLN S A LL RS Sbjct: 60 PKVLCMVNPQTRELLNSSSRGATVLLLRS 88
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METLZ (50S ribosomal protein L15e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl15e PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.031e-18 Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 84 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVIWLILLIMPSVMTQELIGY 527 Y +V + W+K ++ L R +R+ ++VR+ RPTR D+AR LGYKAKQ + G+ TN+ G+ + ++ +S+AEERA + + VLNSYW+ +D KY+EVI L+ PSV+ + + + Sbjct: 6 YGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQ---GIIVVRASIRRGGRRKSRYIRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVI-LVDRNSPSVLADKNLAW 150 HSP 2 Score: 32.7278 bits (73), Expect = 2.031e-18 Identity = 17/43 (39.53%), Postives = 24/43 (55.81%), Query Frame = 2 Query: 506 DPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 634 D + W+ + + R RG TSAG++ RGL +G K RPS Sbjct: 145 DKNLAWVADT--RGRVFRGKTSAGRRARGLHNRGTGTEKCRPS 185
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 52/160 (32.50%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVIWLILLIMPSVMTQELIGYAILSISTGN 554 M Y +V E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA ++ + VLNSYW+ +D K++E+I L+ PS+ + + +STGN Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKH--SKKPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEII-LVDPCHPSIKNDKSYSW----LSTGN 153
BLAST of CK933378 vs. ExPASy Swiss-Prot
Match: RL15E_NANEQ (50S ribosomal protein L15e OS=Nanoarchaeum equitans GN=rpl15e PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.661e-17 Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 3 Query: 75 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVI 473 MG Y +V L+ K + + L + R ++R+ P IV V RPTR D+AR LGYK I G+ + + +AEERA R + VL SYW+ ED YK++EVI Sbjct: 1 MGLYQYVRALY-KDPKEFLGELYKQRIQQWRREPPIVEVERPTRIDRARALGYKP---LPGIKIVRVRVRKGTRKREEIKGGRRPKAEYRIRPLGVNLQWIAEERANRLHRNMEVLGSYWVGEDGLYKWYEVI 129 HSP 2 Score: 45.4394 bits (106), Expect = 1.661e-17 Identity = 24/57 (42.11%), Postives = 31/57 (54.39%), Query Frame = 2 Query: 482 PAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 652 P + I N P WL + R RG TS+ +K+RGLR G K RPS+RA +K Sbjct: 133 PFNPNIYNRPEYVWLLQKNQRGRVFRGKTSSARKFRGLRNGGLGAEKVRPSKRANFK 189 The following BLAST results are available for this feature:
BLAST of CK933378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933378 ID=CK933378; Name=CK933378; organism=Citrus sinensis; type=EST; length=883bpback to top |