CK933459

Overview
NameCK933459
Unique NameCK933459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.056e-20
Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  307 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRD 768
            L N  D  Y G ++IGTP Q F V+FDT SS+LWVPS  C                      N T   I YG+G + G    D V++G+LV  +Q F  + +E    F    +DG+LGL +  IS   AIP++  + +Q  + EPVF+F+L++D
Sbjct:   63 LRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFCTSPACSTHVRFRHLQSSTFRLTNKT-FRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYG--FEGRIYDGVLGLNYPNISFSGAIPIFDKLKNQRAISEPVFAFYLSKD 213          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 69/240 (28.75%), Postives = 114/240 (47.50%), Query Frame = 1
Query:   76 KFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLH-------GSLGDSDTDIVALNNF-MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV-WYNMLDQGLVKEPVFSFWLNR 765
            KFT I   + +   L+ A  A P +  + I L K                 +  ++  + +YN H       G + D+    V + ++  D +Y+G+V+IGTP + F + FDTGSS+LW+ S  C  +                   +G + +I YG G + SG  ++DNV +G L++K Q  IE  K  + +F     DG+LGLGF  I+  + +     N++ QGL+  P+F  +L +
Sbjct:    2 KFTLISSCIAI-AALAVAVDAAPGEKKISIPLAKNP---------NYKPSAKNAIQKAIAKYNKHKINTSTGGIVPDAGVGTVPMTDYGNDVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLC--TNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQT-IELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGK 228          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP3_RHINI (Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19
Identity = 74/241 (30.71%), Postives = 118/241 (48.96%), Query Frame = 1
Query:   76 KFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTD-------IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD 768
            KFT I   + L L ++ +  A P+   V I L K K  + N          +  ++  + +Y+ H S+  S++        +   + + D +Y+GEV++GTP  T  + FDTGSS+LW  S+ C  +                  R+G + +I YG G + SG    D V +G L +++Q    A +EAS  F +   DG+LGLGF  I+   G   PV  N++ QGL+  PVF  +L ++
Sbjct:    2 KFTLISSCVTLAL-MTLSIEAAPSGKKVNIPLTKNKDYKPNA---------KNAIQKAIAKYHRHRSVSSSNSTSTDGIGYVPVTDYYNDIEYYGEVTVGTPGVTLKLDFDTGSSDLWFASSLC--TNCGSSQTKYNPNESSTYARDGRTWSISYGDGSSASGILGTDTVILGGLTIRHQTIELARREAS-QFQSGPSDGLLGLGFDSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKE 228          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP5_RHINI (Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.409e-18
Identity = 75/244 (30.74%), Postives = 115/244 (47.13%), Query Frame = 1
Query:   76 KFTAIR--VALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTD--------IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD 768
            KF+ I   VAL + ++ + AA   PN   V I L K K  + N          +  ++  + +Y+ H S   S           +   + + D +YFG+V +GTP  T  + FDTGSS+LW  S+ C  +                  ++G + +I YG G + SG    D V +G L ++ Q    A +EAS +F     DG+LGLGF  I+   G   PV  N++ QGL+  PVF  +L ++
Sbjct:    2 KFSLISSCVALAVLVLSTEAA---PNGKKVNIPLTKNKDYKPNA---------KNAIQKVLAKYHRHRSTSSSSNSTSTDGIGRVPVTDYYNDIEYFGQVKVGTPGVTLKLDFDTGSSDLWFASSLC--TNCGYSQTKYNPNQSRTYAKDGRAWSISYGDGSSASGILGTDTVVLGGLTIQRQTIELARREAS-SFQNGPSDGLLGLGFNSITTVRGVKTPV-DNLISQGLISNPVFGVYLGKE 229          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP_SYNRA (Syncephapepsin OS=Syncephalastrum racemosum GN=SPSR PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.371e-18
Identity = 57/151 (37.75%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  322 DAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS--IGKAIPVWYNMLDQGLVKEPVFSFWLNR 765
            D +Y+  VS+GTP+Q+  + FDTGSS+LW  S  C                     + G S  I YG G + SG  + DNV++G L +  Q    AT+E+S +F +   DGILGLGF  IS   G   PV  N++ Q L+ +P+F  WL +
Sbjct:   86 DVEYYATVSVGTPAQSIKLDFDTGSSDLWFSSTLC----TSCGSKSFDPTKSSTYKKVGKSWQISYGDGSSASGITATDNVELGGLKITGQTIELATRESS-SFSSGAIDGILGLGFDTISTVAGTKTPV-DNLISQNLISKPIFGVWLGK 230          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP4_RHINI (Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.093e-17
Identity = 56/169 (33.14%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  271 GSLG-DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV-WYNMLDQGLVKEPVFSFWLNRD 768
            GS G +S   +   ++  D +Y+GEV++GTP     + FDTGSS+LW  S  C  +                  ++G + +I YG G + SG   +D V +G L +KNQ  IE  K  + +F +   DG+LGLGF  I+    +     N++ QGL+  PVF  +L ++
Sbjct:   69 GSAGTESSGSVPVTDDGNDIEYYGEVTVGTPGIKLKLDFDTGSSDLWFASTLC--TNCGSSQTKYDPSQSSTYAKDGRTWSISYGDGSSASGILGKDTVNLGGLKIKNQ-IIELAKREASSFSSGPSDGLLGLGFDSITTVSGVQTPMDNLISQGLISNPVFGVYLGKE 234          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP1_RHINI (Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.436e-17
Identity = 70/235 (29.79%), Postives = 107/235 (45.53%), Query Frame = 1
Query:   76 KFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKL--DQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNR 765
            KFT I   + L   ++ A  A PN   + I L K           + + ++K         R+    G   ++   +  ++   D +Y+GEV++GTP     + FDTGSS++W  S  C  S                   +G + +I YG G + SG  + DNV +G L++K Q  IE  K  S  F     DG+LGLGF  I+   G   PV  N++ QGL+  P+F  +L +
Sbjct:    2 KFTLISSCVAL-AAMTLAVEAAPNGKKINIPLAKNNSYKPSAKNALNKALAKYNR------RKVGSGGITTEASGSVPMVDYENDVEYYGEVTVGTPGIKLKLDFDTGSSDMWFASTLC--SSCSNSHTKYDPKKSSTYAADGRTWSISYGDGSSASGILATDNVNLGGLLIKKQT-IELAKRESSAFATDVIDGLLGLGFNTITTVRGVKTPV-DNLISQGLISRPIFGVYLGK 225          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP2_RHINI (Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  316 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD 768
            + D +Y+G+V++GTP  T  + FDTGSS+LW  S  C  +                  ++G + +I YG G + SG    D V +G L +  Q  IE  K  + +F +    G+LGLGF  I+   G   PV  N++ QGL+ +P+F  +L ++
Sbjct:   79 YNDIEYYGKVTVGTPGVTLKLDFDTGSSDLWFASTLC--TNCGSSQTKYNPNQSSTYAKDGRTWSISYGDGSSASGILGTDTVTLGGLKITKQT-IELAKREATSFQSGPSYGLLGLGFDTITTVRGVKTPV-DNLISQGLISKPIFGVYLGKE 228          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP_RHIPU (Mucorpepsin OS=Rhizomucor pusillus PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13
Identity = 52/172 (30.23%), Postives = 74/172 (43.02%), Query Frame = 1
Query:  280 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAK-----FDGILGLGFQEISIGKA------IPVWYNMLDQGLVKEPVFSFWLN 762
            GD   D   L +F   +Y   VSIGTP Q F ++FDTGSS+ WVP   C  S                      +  I YGTG  +G + +D++ VG   VK Q        +  T   +       DG+ G  + + +  +A        V  N+  QGL+  PVFS ++N
Sbjct:   69 GDGSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGMFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMN 240          
BLAST of CK933459 vs. ExPASy Swiss-Prot
Match: CARP_RHIMI (Mucorpepsin OS=Rhizomucor miehei PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12
Identity = 52/204 (25.49%), Postives = 82/204 (40.20%), Query Frame = 1
Query:  184 LDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQ-----DFIEATKEASITFLAAKFDGILGLGFQEISIGKA------IPVWYNMLDQGLVKEPVFSFWLN 762
            L  ++R   QT   +++             +  D   D     +F   +Y   VSIGTP Q F ++FDTGSS+ WVP   C  S                      +  I YGTG  +G + +D++ +GD+ V  Q     D +               DG+ G  + + +  +A        V  N+  QGL+  P+FS ++N
Sbjct:   40 LTSVSRKFSQTKFGQQQLAEKLAGLKPFSEAAADGSVDTPGYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFKATNYNLNITYGTGGANGLYFEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNADIFLDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYKQGLISSPLFSVYMN 243          
The following BLAST results are available for this feature:
BLAST of CK933459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PAG1_BOVIN1.056e-2037.01Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
CARP_RHICH1.992e-1928.75Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
CARP3_RHINI4.439e-1930.71Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1[more]
CARP5_RHINI6.409e-1830.74Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2[more]
CARP_SYNRA8.371e-1837.75Syncephapepsin OS=Syncephalastrum racemosum GN=SPS... [more]
CARP4_RHINI1.093e-1733.14Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1[more]
CARP1_RHINI2.436e-1729.79Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 S... [more]
CARP2_RHINI5.078e-1533.12Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2[more]
CARP_RHIPU2.134e-1330.23Mucorpepsin OS=Rhizomucor pusillus PE=1 SV=2[more]
CARP_RHIMI1.059e-1225.49Mucorpepsin OS=Rhizomucor miehei PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004285_C06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933459 ID=CK933459; Name=CK933459; organism=Citrus sinensis; type=EST; length=772bp
GGGGGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCTTTTGAAAG
ATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGGGTTGCAC
TTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCCAAATGAT
GGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGATCAATCG
CCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGAACACCTG
TCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATACTGATATT
GTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGGTTAGTAT
TGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGAAGTTCTA
ATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTGCTATTTC
CACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGAATGGGAC
ATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTCTTTAGCC
AGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGATTTCATT
GAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGTTTGATGG
TATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCCATTCCAG
TCTGGTATAATATGCTTGATCAAGGTCTCGTTAAAGAACCAGTTTTTTCA
TTTTGGTTAAACCGTGATATTG
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