CK933895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13_CAEEL (60S ribosomal protein L13 OS=Caenorhabditis elegans GN=rpl-13 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.248e-45 Identity = 96/194 (49.48%), Postives = 131/194 (67.53%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP----ITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N ++ N HF+KHW +KTWF+QPARK RR+ RQ KA++I PRP AG LR VV +YN K R GRGF+L+ELKAAGI + A TIGI+VD RR N++ EGL++N RLK YKAKL++FP++A K GDS+ EEL A Q++G +P IT ++P +VT + + + LR ERA++++ G R Sbjct: 6 NQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVRCPQKRYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPR----QVTDAERKVEIFRLLRKERADKKYRGKR 195
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13_LUMRU (60S ribosomal protein L13 OS=Lumbricus rubellus GN=RPL13 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.748e-43 Identity = 92/170 (54.12%), Postives = 119/170 (70.00%), Query Frame = 2 Query: 149 FNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 FNQPARK RR+VAR+KKA+ I PRP AG LRP V QT KYN +LR GRGF+L+ELKAAGI KK A IGISVD RR+N+S+E LQ NVQRLK Y++KL++FP++ K GD+ EE+ ATQ++G +P T +T + + K +D+LR RA++R G R Sbjct: 2 FNQPARKERRRVARRKKALAIAPRPAAGSLRPQVRCQTFKYNTRLREGRGFSLDELKAAGINKKEARAIGISVDVRRRNKSVESLQLNVQRLKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKPEKARAITDEERKVKVFDRLRQARAHKRLAGKR 171
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13_CANAL (60S ribosomal protein L13 OS=Candida albicans GN=RPL13 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.511e-33 Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 104 NGHFKKHWQNYVKTWFNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITL---EKPTVDLVKVTQDMKSFKAYDKLRIERANER 643 N HF+KHWQ V+ F+Q +K R+ +R +KA KI PRP LRPVV T+KYN K+RAGRGFTL ELKA GI K A TIGISVDHRR+N+S E +NV RL+ YK+KLV+F ++ + + +++ V+ P L E P + + ++ K Y +R +RA E+ Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSATFPVEQPAPESGLRAVEVPEQTAYRTLRLARNEKKYKGIREKRAKEK 192
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13A_YEAST (60S ribosomal protein L13-A OS=Saccharomyces cerevisiae GN=RPL13A PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.367e-33 Identity = 84/190 (44.21%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N I HF+KHWQ VK F+Q +K R+ AR +A KI PRP LRPVV T+KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 6 NLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRNGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13B_YEAST (60S ribosomal protein L13-B OS=Saccharomyces cerevisiae GN=RPL13B PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33 Identity = 84/190 (44.21%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 89 NNVIPNGHFKKHWQNYVKTWFNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 N I HF+KHWQ VK F+Q +K R+ AR +A KI PRP LRPVV T+KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 6 NLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAARAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRDGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CK933895 vs. ExPASy Swiss-Prot
Match: RL13_SACEX (60S ribosomal protein L13 OS=Saccharomyces exiguus GN=RPL13 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33 Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 2 Query: 110 HFKKHWQNYVKTWFNQPARKNRRQVARQKKAIKIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 658 HF+KHWQ VK FNQ +K R+ AR KA KI PRP LRPVV T+KYN K+RAGRGFT E+KAAG+ A TIGI+VDHRR+N++ E + NVQRLK Y++K++VFPR + PE QV + +P V+ AY LR+ R+ +R+ G R Sbjct: 13 HFRKHWQERVKVHFNQAGKKASRRDARVAKAAKIAPRPL-DLLRPVVRAPTVKYNRKVRAGRGFTFGEVKAAGLTPAYARTIGIAVDHRRQNKNQEMFELNVQRLKEYQSKIIVFPRNGK-------VPE----TEQVLSTAAAFPIAQPAVETETRAVQDNGESAYRTLRMARSEKRYKGIR 183 The following BLAST results are available for this feature:
BLAST of CK933895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933895 ID=CK933895; Name=CK933895; organism=Citrus sinensis; type=EST; length=800bpback to top |