CK933899

Overview
NameCK933899
Unique NameCK933899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.709e-22
Identity = 75/229 (32.75%), Postives = 111/229 (48.47%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 778
            RA +AEFI+T +F++    + M   +  +  A+                         ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K         +  G  T A   + G G+      EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +WD+HWV+WVGP IG  LA + +
Sbjct:   52 RAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLG----AEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYH 273          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22
Identity = 76/237 (32.07%), Postives = 112/237 (47.26%), Query Frame = 2
Query:  107 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            P E T     RA +AEFI+T +F++    + M    +  +                            ISGGH+NPAVTFG F+   +SL R I Y + Q+LG+     ++K     Q        A  ++ G    + +  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA   G A+V      W++HW++WVGP IG  LA + ++
Sbjct:   45 PSELTSWSFYRAGIAEFIATFLFLYITVLTVMGV--VRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQ 278          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22
Identity = 72/236 (30.51%), Postives = 114/236 (48.31%), Query Frame = 2
Query:  107 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            P E +     RA +AEF++T +F++    + M   +   +   +                        ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K    G        A  ++ G    + +  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +W++HW++WVGP+IG  LA I ++
Sbjct:   43 PGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKR--SDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQ 275          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.030e-21
Identity = 71/221 (32.13%), Postives = 103/221 (46.61%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIT 796
            L+  LAEF++T   +FAG G+     K    GA T                       ++SG H+NPAVT G  V G     R   Y +AQ   +T A ++L+ +  G+     A   G     ++V E V+TF L++ + A A D +  ++G +A +A+G  +  N+L  G   GASMNPA   GPALV   +   WVY +GP  G       Y    +T
Sbjct:   56 LQMLLAEFLATFFLMFAGLGAITVEEK---KGAVT---FPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLRLMFGGRHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATDDQ--AVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTALWVYILGPFAGAAAGAWAYSLIRLT 268          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.030e-21
Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 2
Query:  137 RAALAEFISTLIFVF--AGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 790
            R+ ++E +++ ++VF   G  +G+        GA+  S                     +ISG H+NPAVT    V  +IS +R  +Y  AQ  G      LL  VT     G   +A + S+ +  W     E ++TF LV   Y  + DP K  +G  A  +IG    A       +    +NPA   GP+ V   WD+HWVYW GPL+GG  +G+VYE+ F
Sbjct:   66 RSIISECLASFMYVFIVCGAAAGVGV------GASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF 277          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.487e-20
Identity = 69/226 (30.53%), Postives = 105/226 (46.46%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTS----AFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            RA +AEF++T +F++    + M  +K                                +SGGH+NPAVTFG  +   +SL R + Y + Q LG+     ++K   +    S    A A+S G    + +  E+V TF LVYTV+ +A D K+      +  +AP+ IGF V    LA     G  +NPA   G A++      W  HW++WVGP  G  LA + ++
Sbjct:   60 RAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTV--GIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVF-SATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQ 282          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.942e-20
Identity = 74/230 (32.17%), Postives = 107/230 (46.52%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV-----SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RAA+AEF +TL+ V     + +   + +  G    +                      ISGGH+NPAVTF   +   +SL R  LY +AQ +G+     L + +  G         A  L++G      VV E+V TF LVYTV+ +A DPK+      +  +AP+ IG  V    LA     G  +NPA   GPALV     + +W + W++WVGP  G   A I + +
Sbjct:   35 RAAIAEFTATLLLVCISVSTVIGEKRQSGEGG---AGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVF-SATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHY 260          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 65/225 (28.89%), Postives = 108/225 (48.00%), Query Frame = 2
Query:  125 PDALRAALAEFISTLIFVFAGEG----SGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGV-WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            P  L+  ++E ++T + VF   G    SG   ++++  G +                        +ISG H+NPAVT    V  +   ++   YW AQ  G+  A  +LK V +         ++ VG  W+++V E+++TF +++   A A D +  ++G +A +A+G  V    +  GA  G SMNPA   GPAL S  +D  W+Y++GP++G       Y F
Sbjct:   45 PHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIH--PVDVIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTF 256          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20
Identity = 72/228 (31.58%), Postives = 108/228 (47.37%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            R  +AEF++T +F++    + M  +K T   A                         +   GH+NPAVTFG F+   +SL R + Y I Q LG+     ++K      ++ NG   +  A   G    + +  EIV TF LVYTV+ +A D K+      +  +AP+ IGF V    LA     G  +NPA   G A++     +W +HW++WVGP IG  LA I ++
Sbjct:   54 RPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS---GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVA--PGYTKGDGLGAEIVGTFILVYTVF-SATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQ 275          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19
Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIT 796
            +ISG H NPAVT    V       +  LY  AQL GS +A L L+ + N    + F  +       A+V EI+++F L++ +   A D +  + G +A IA+G  +  N+   G   GASMNPA   GPA+V   +   WVY VGP +G    G VY F   T
Sbjct:   95 HISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNFMRFT 255          
The following BLAST results are available for this feature:
BLAST of CK933899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PIP12_ARATH2.709e-2232.75Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP2_PEA4.621e-2232.07Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP1_SOLLC7.883e-2230.51Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
NIP14_ORYSJ1.030e-2132.13Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
BIB_DROME1.030e-2131.70Neurogenic protein big brain OS=Drosophila melanog... [more]
PIP16_MAIZE1.487e-2030.53Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ1.942e-2032.17Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
NIP21_ORYSJ4.326e-2028.89Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
PIP11_MAIZE9.636e-2031.58Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
NIP42_ARATH1.644e-1936.81Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933899 ID=CK933899; Name=CK933899; organism=Citrus sinensis; type=EST; length=806bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCATACCCCAAAGGT
TCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGTAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTTATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTACCAGTC
TCACGA
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