CK933899

Overview
NameCK933899
Unique NameCK933899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 71/226 (31.42%), Postives = 97/226 (42.92%), Query Frame = 2
Query:  146 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV----------GVWNAV---VFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            LAE I T    FAG GS +        G                          +ISG H+NPAVT G   GG   + +   Y IAQ+LG+  A  LL  + +G   + F L+ G           G +N V   V E+VMT   ++ +  +     K   G  AP+AIG  +    L        S+NPA   GPAL    W+    W++WV PL+GG L G++Y
Sbjct:    7 LAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIG----HISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASG--AAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGST--HGKAPAG-FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAIGQLWLFWVAPLLGGVLGGVIY 223          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.464e-16
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISG H+NP++T    V G     +  LY  AQ LG+T A L+   V  G      A    +   +A   E++ T  +V+   A    P + +LG +    IG ++   +L  G   G SMNPA   GPA+V+W +++ W+Y   P+IG  +  + Y
Sbjct:   98 HISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVY-GVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQ-NLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTY 252          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.464e-16
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS-----------SGVGVWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            +ISG H+NPAV+FG + GG       + Y IAQ+ G      +L  + +GQ   + A              G  + + ++ EIVMT F L+  + +T     KG     APIAIG  +    L        S+NPA   GPAL    W+    W++W  P+IG  LAG++Y +F
Sbjct:   56 HISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG----FAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVGDWAVSQLWLFWAAPIIGAILAGVIYRYF 225          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.464e-16
Identity = 75/243 (30.86%), Postives = 105/243 (43.21%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX-------------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVA------CLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPK--KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPAL--VSWSWDNHW----VYWVGPLIGGGLAGIVYEF 784
            +  +AEFI T   VF G G+  A   +  +G   P+                                  NISG H+NPAVT G +          + Y IAQLLG+  A      C  +   T G    A A   G+G W A++ E V TF L+ T+   A+D +  KG  G I    IG  V   I   G   G+S+NPA  FGP L  + ++  N W    +Y +GP++G  LA + Y++
Sbjct:    6 KRCIAEFIGTFFLVFFGAGAA-AITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGL-GATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKGFAGII----IGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAALTYQY 242          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15
Identity = 63/223 (28.25%), Postives = 99/223 (44.39%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFV--------TNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            L+  +AE + T   +FAG  + +A N         P                      +ISG H NPAVT      G   L +   Y I+Q++GST+A   L+ +        +         L SG  + + V+ E ++TF L++ +   A D +  ++G +A +A+G  V  N++  G   GASMNP    GPA+V   +   W+Y V P++G      VY
Sbjct:   51 LQKLMAEVLGTYFLIFAG-CAAVAVNTQHDKAVTLPGIAIVWGLTVMVLVYSLG----HISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVI-EFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIVSPIVGAVSGAWVY 265          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15
Identity = 63/215 (29.30%), Postives = 96/215 (44.65%), Query Frame = 2
Query:  149 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-----FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            AEF+ T I +F    + +   K  + GA +P                      +ISG H+NP++T       +   L+   Y   Q+LGS  A   LK     F++ G T     +S+      A   E ++TF L++ V A A D +  ++G +A IA+G  V  NIL  G   G SMNP    GPA+ + ++   W+Y + P +G      VY
Sbjct:   87 AEFVGTFILIFFATAAPIVNQK--YGGAISP---FGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTA----QAFFTEFIITFNLLFVVTAVATDTR--AVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVY 290          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.190e-15
Identity = 63/210 (30.00%), Postives = 92/210 (43.81%), Query Frame = 2
Query:  149 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            AEF+ T I +F      +   K  ++GA T                       +ISG H+NP++T       +        Y  AQ+  S  A   LK V +   +    + S V +  A   E ++TF L++ V A A D +  ++G +A IA+G  V  NIL  G   G SMNP    GPA+ S ++ + WVY V P +G      VY
Sbjct:   82 AEFVGTFILIFTATAGPIVNQK--YDGAET---LIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPS-VSLGQAFALEFIITFILLFVVTAVATDTR--AVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVY 283          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15
Identity = 64/210 (30.48%), Postives = 93/210 (44.29%), Query Frame = 2
Query:  146 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN-GQTTSAFALSSGVGVW------NAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIG 754
            + EF+ T   +FAG  S +  N+        P                      ++SG H NPAV+            +   Y  AQLLGST+A  +L+ V +      +      VG +       + V E + TF L++ + A A D  K + G+ A IAIG  +  +IL  G   GASMNPA   GPAL+   + + W+Y V P+IG
Sbjct:   46 IGEFVGTFTMIFAG-CSAIVVNETYGKPVTLPGIALVWGLVVTVMIYSIG----HVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATD--KRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIG 248          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15
Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            ISGGH NPAV+ G  V G +     + Y IAQ+ G+ +A  +L  +  G+      +FA +        G  +  A+V E+VMTF  +  +  +     +      APIAIG  +    L        S+NPA   G AL    W+    W++W+ PL G  +AGIV++
Sbjct:   57 ISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGST---HRRVPAGFAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVGGWALSQLWLFWIAPLFGAAIAGIVWK 222          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 61/216 (28.24%), Postives = 95/216 (43.98%), Query Frame = 2
Query:  149 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-----FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 781
            AEF+ T I +F    + +   K  + GA +P                      +ISG H+NP++T       +   L+   Y   Q L S  A   LK     F++ G T     +S+      A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL  G   G SMNP    GPA+ + ++   W+Y + P +G      VY+
Sbjct:   78 AEFVGTFILIFFATAAPIVNQK--YGGAISP---FGNAACAGLAVATVILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFHPFLSGGVTVPDATVSTA----QAFFTEFIISFNLLFVVTAVATDTR--AVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYK 282          
The following BLAST results are available for this feature:
BLAST of CK933899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQPZ_RHOPA4.949e-1631.42Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
NIP71_ARATH6.464e-1631.85Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
AQPZ_SHEON6.464e-1633.33Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
AQPM_METTH6.464e-1630.86Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
NIP12_ARATH1.440e-1528.25Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
NIP31_ORYSJ3.208e-1529.30Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
NIP51_ARATH4.190e-1530.00Probable aquaporin NIP5-1 OS=Arabidopsis thaliana ... [more]
NIP31_ARATH7.146e-1530.48Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
AQPZ2_RHIME9.334e-1531.95Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
NIP31_MAIZE1.592e-1428.24Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933899 ID=CK933899; Name=CK933899; organism=Citrus sinensis; type=EST; length=806bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCATACCCCAAAGGT
TCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGTAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTTATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTACCAGTC
TCACGA
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