CK933899

Overview
NameCK933899
Unique NameCK933899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP_NOSCE (Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 55/182 (30.22%), Postives = 81/182 (44.51%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGVWNAV----VF--EIVMTFGLVYTVYATA--------------LDPKKG---SLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            +I+  H NPA+TF A     +    GI   I Q+ G  +A L    V  G+  +   ++    V + V    +F  E  +T  LVY  +A                LDP +G        AP+AIGF +G   L G A  G + NP ++  P +++ +WD  WVY +G   GG L G +  F
Sbjct:   62 DITVAHFNPAITFSAMCFRRLPFFGGIFIIIFQVAGFIIAGLASVAVLPGKYKNKLEIARPKRVADNVSRGRIFGTEFFLTAILVYVAFAVGVNPYTPPKDEHGDQLDPDEGLTEGRKITAPLAIGFTLGFCALLGIASSGGAFNPGIVLSPMILTGTWDFWWVYLLGQFSGGLLGGGLQRF 243          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12
Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSS---------GVGVWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            ISGGH NPAV+    V G +     I YW+AQ+LG+     +L  + +G+   SA  L+S         G  +   ++ EI++T F ++  + +T+     G     APIAIGF +    L        S+NPA   G AL   + +    W++WV PL+G  +  I+++
Sbjct:   57 ISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG----FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADTAALSQLWLFWVAPLVGAVIGAIIWK 222          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVG--------VWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G        +  A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA   GPAL    W+ +  W++W+ P+ G  +  + Y
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAY 226          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVG--------VWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G        +  A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA   GPAL    W+ +  W++W+ P+ G  +  + Y
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAY 226          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11
Identity = 67/237 (28.27%), Postives = 102/237 (43.04%), Query Frame = 2
Query:  152 EFISTLIFVFAGEG--SGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL--LKFVTN-------GQTTSAFALSSGVGVWNAV---VFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG-FIVGANILAGGAFDGASMNPAVLFGPALV----------SWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            EF+ TLI +  G G  +G+   K   N     S                      +S  H+NPAVT G  + G +     + Y +AQ  G+ +  +L  L+F  +       G   + F  S+G  + + V   + EI+ TF LV T++A  L   +  +GT    A+G  IVG  +  GG   G ++NPA   GP ++             W   W+  VGP+IG  LA +V+  F
Sbjct:    8 EFLGTLILILLGNGVVAGVVLPKTKSNS----SGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILATF--STGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAGIGT---FAVGTLIVGIGLSLGGT-TGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALAVLVFSLF 234          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11
Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT----TSAFALS-------SGVGVWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            ISG H+NPAV+ G +VGG     + + Y +AQ+LG   A  +L  + +G+      + FA +        G  +  A+V E+V+T   L+  + AT+    +G     APIAIG  +    L        S+NPA     AL    W+    W++WV P++G  L  + Y
Sbjct:   56 ISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATSKRAPQG----FAPIAIGLTLTLIHLISIPVTNTSVNPARSTAVALYVGDWAVSQLWLFWVAPILGAVLGALAY 221          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 69/235 (29.36%), Postives = 96/235 (40.85%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGM-AFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----------QTTSAFALSS--GVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWS---WDNHWVYWVGPLIGGGLAGIVY 778
            ++  +AEFI T   V  G GS + A       G NT                          +ISGGH NPAV+FG ++G      +   Y  AQ+LG+ VA L +  V  G             T+ F   S  G G   A++ E V+TF  ++ +    +  K    G  AP AIG  +    L        S+NPA   G AL   +       W++W+ P+ G  LAG VY
Sbjct:    1 MKKYIAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTF--IFLIVILGVTDKTAPAG-FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVY 232          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11
Identity = 56/171 (32.75%), Postives = 82/171 (47.95%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALS-------SGVGVWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISG H+NPAV+ G + GG     +   Y +AQ+LG+  A  +L  + +G         FA +        G  +  A+V E+VMT F L+  + AT    K+   G  AP+AIG  +    L        S+NPA   G AL    W+    W++W+ P+IG  L   VY
Sbjct:   55 HISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGAT---DKRAPAG-FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWAVQQLWLFWLAPIIGAVLGAKVY 221          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11
Identity = 55/188 (29.26%), Postives = 82/188 (43.62%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLL--------------KFVTNGQTTSAFALSS----GVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGP----ALVSWSWDNH-------WVYWVGPLIGGGLAGIVYEFF 787
            +SGGH+NPAV+F     G +   +   Y  AQLLG+ V    +              K +  G+  +AF  ++     V V  A V ++V T  L+  V+A       G    + PI IG ++     + G   G +MNPA    P    AL  W ++         W+  VGP+IG  L G++Y  F
Sbjct:   78 VSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFDSRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTFGNNFWWIPVVGPMIGAVLGGLIYVLF 265          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.261e-11
Identity = 62/235 (26.38%), Postives = 97/235 (41.28%), Query Frame = 2
Query:  146 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL--LKFVTNGQTT-------SAFALSSGVGVWNA-VVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV----------SWSWDNHWVYWVGPLIGGGLAGIVYEFFF 790
            LAEF+ T++ +  G+G  +  N +        S                      ISG H+NPAVT G    G     +   Y  +Q+LG+ V  +L  L ++ + + T       + F     V  + A ++ EI+ T  L+  V     +     L    P+ +GF+V +  L+ G   G ++NPA  FGP L              W   WV  +GP+IGG L   +Y + F
Sbjct:    5 LAEFLGTMLLIILGDG--VVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLADGLN---PLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYNWLF 234          
The following BLAST results are available for this feature:
BLAST of CK933899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP_NOSCE5.663e-1230.22Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP ... [more]
AQPZ_BRUSU7.395e-1231.18Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQPZ_BORPA1.648e-1130.81Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.648e-1130.81Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
GLPF_STRR62.810e-1128.27Glycerol uptake facilitator protein OS=Streptococc... [more]
AQPZ_PSEAE2.810e-1131.18Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
AQPZ_SYNY33.670e-1129.36Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQPZ_CHRVO3.670e-1132.75Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQP9_MOUSE4.794e-1129.26Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1[more]
GLPF_THEMA6.261e-1126.38Probable glycerol uptake facilitator protein OS=Th... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933899 ID=CK933899; Name=CK933899; organism=Citrus sinensis; type=EST; length=806bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCATACCCCAAAGGT
TCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGTAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTTATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTACCAGTC
TCACGA
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