CK933899

Overview
NameCK933899
Unique NameCK933899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.256e-27
Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            NISGGH NPAV+    + G +  +  I YW++QL G  +   L K V+  +     + +AFA+      V  A+  EIVMT  LV  V   A++ K  ++G +AP +IGF V  +ILAGG   GA MNPA  FGPA+++  WD HW+YW+GPL+ G   G++   F
Sbjct:   87 NISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLLIRLF 250          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.640e-27
Identity = 77/231 (33.33%), Postives = 115/231 (49.78%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGAN----TPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RA +AEFI+TL+F++    + + +   T    N    T                        ISGGH+NPAVTFG  +   ++L+R ++Y +AQ LG+     L+K   +   T     A  LS G  +   V  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +WD+HW++WVGP  G  +A   ++F
Sbjct:   38 RALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQF 267          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 123.25 bits (308), Expect = 1.640e-27
Identity = 62/164 (37.80%), Postives = 97/164 (59.15%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 790
            ++SG H+NPAVT G  V  ++S+L+G  Y ++Q +G+     ++K  T  +      ++    G+     V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  LA   + GASMNPA  FGPA+V  ++ + WVYWVGP++GG +AG VY  FF
Sbjct:   74 HVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVC-DNRRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNYTDLWVYWVGPIVGGIVAGAVYRLFF 236          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.640e-27
Identity = 75/219 (34.25%), Postives = 107/219 (48.86%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            RA  AEF++TL+FVF G GS +       N                           +ISG H+NPAVT    VG ++S+LR   Y  AQLLG+     LL  +T        A   LS+      AV  E+ +T  LV  ++A+  D ++G       ++IGF V    L G  + G SMNPA    PA+V+  +D+HWV+W+GPL+G  L  ++Y +
Sbjct:   11 RAVFAEFLATLLFVFFGLGSAL-------NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFAST-DERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNY 221          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.142e-27
Identity = 85/250 (34.00%), Postives = 122/250 (48.80%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFITSLT 805
            E T     RA +AEFI+TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +WD+ W++WVGPLIG  +A   +++    S T
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAT 279          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.142e-27
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVG-VWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            NISGGH NPAV+  A + G ++L+  + YW++QLLG  +   L K V+  +     + +AF      G V  A+V EI++T  L   V   A++ K  + G +AP +IGF V  +ILAGG   G  MNPA  FGPA+V+  W+ HW+YW+GPL+ G L G++   F
Sbjct:   85 NISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEK--TKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGLLVGLLIRCF 248          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.797e-27
Identity = 85/250 (34.00%), Postives = 122/250 (48.80%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFITSLT 805
            E T     RA +AEFI+TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +WD+ W++WVGPLIG  +A   +++    S T
Sbjct:   34 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAT 280          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.653e-27
Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFAL-SSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDNHWVYWVGPLIGGGLAGIV 775
            NISGGH NPAV+    V G +  +  I YWI+QL G  +   L K V+  +     + +AFA+      V  A+  EI++T  LV  V   A++ K  ++G +AP +IGF V  +ILAGG+  GA MNPA  FGPA+++  WD HW+YW+GPL+ G   G++
Sbjct:   85 NISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLL 244          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.771e-27
Identity = 80/243 (32.92%), Postives = 121/243 (49.79%), Query Frame = 2
Query:  113 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            E T     RA +AEF++TL+F++    + + +   T   A+ P                             +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA   G A++     +WD+HW++WVGP IG  +A   +++
Sbjct:   29 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQY 268          
BLAST of CK933899 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27
Identity = 78/219 (35.62%), Postives = 115/219 (52.51%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGVWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVLFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVY 778
            L+A  AEF++TLIFVF G GS + +          PS                      +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +   N ++  A  AL++      AVV E+++TF L   V+++    +   +G+ A ++IG  V    L G  F G SMNPA  FGPA++   + + HWV+WVGP++G   A I+Y
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKWPSAM------PSVLQISLAFGLAIGTMAQALGP-VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAHWVFWVGPIVGAATAAIIY 221          
The following BLAST results are available for this feature:
BLAST of CK933899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP8_RAT1.256e-2741.57Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
PIP25_ARATH1.640e-2733.33Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
AQP_ANOGA1.640e-2737.80Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP2_HUMAN1.640e-2734.25Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
PIP24_MAIZE2.142e-2734.00Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
AQP8_HUMAN2.142e-2741.57Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
PIP23_MAIZE2.797e-2734.00Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
AQP8_MOUSE3.653e-2741.98Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
PIP25_MAIZE4.771e-2732.92Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
AQP5_SHEEP6.232e-2735.62Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004543_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933899 ID=CK933899; Name=CK933899; organism=Citrus sinensis; type=EST; length=806bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCATACCCCAAAGGT
TCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGTAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTTATTCGGGCCAGCTTTG
GTAAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTACCAGTC
TCACGA
back to top