CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_THEEB (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhD1 PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.657e-68 Identity = 74/131 (56.49%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SH+GF+++GI S T+ G++GAVLQ++SHGLI A+LFFL G +YDR L+EMGG+ + KIF +F+ S+ASLALPGMSGFVAEL+VF G TS + L ++++ F+ A+G+ILTPIY Sbjct: 303 KRKIAYSSISHIGFVLIGIASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELMVFIGFATSDAYSLPFRVIVVFLAAVGVILTPIY 433 HSP 2 Score: 120.168 bits (300), Expect = 1.657e-68 Identity = 66/141 (46.81%), Postives = 83/141 (58.87%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + +++TL + Y + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y LIR+N+ +LP AH+ F+P +I+G V IIYAA TS QRNLK+K Sbjct: 166 ATKFILYTAGSSLFILVAGLAMAFYG-DTVSFDMQTLAAKDYALGFQLLVYAGFLVAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNIIYAALTSYAQRNLKRK 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_THEEB (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.249e-68 Identity = 73/131 (55.73%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSS+SHMGF++LGIG++ GLNGA+LQ++SHGLI+A LFFLAG +YDR +++M G+A +PK F LF+ SMASLALPGMSGFV+EL VF G+ S + K+ + F+ A+G+I+TP+Y Sbjct: 302 KRRLAYSSISHMGFVLLGIGALNGIGLNGAMLQMLSHGLIAAVLFFLAGVTYDRTHTLAMEKMSGIAQSMPKTFALFTASSMASLALPGMSGFVSELTVFLGLTNSDAYSTTFKVGVIFLAAVGVIITPVY 432 HSP 2 Score: 121.324 bits (303), Expect = 6.249e-68 Identity = 66/141 (46.81%), Postives = 82/141 (58.16%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + +LN+ L ++YP+ALE VKLPI P HTWLPD HGEA M+LAG+LLKMG YGLIR N+ +LP AH F+P + +G V IIY A T+ GQ NLK++ Sbjct: 165 ATKFILYTAVGSLFILIAGLGMAFYG-GDFSLNMAALGLKNYPLALELLAYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMVLAGVLLKMGGYGLIRFNLQMLPDAHIYFAPVLIALGVVNIIYGALTAFGQENLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_SYNY3 (NAD(P)H-quinone oxidoreductase chain 4-1 OS=Synechocystis sp. (strain PCC 6803) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.150e-68 Identity = 72/131 (54.96%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+ S TD G++GA+LQ+ISHGLI A+LFF+ G +YDR LDEMGG+ + K F +++ S+ASLALPGMSGFVAEL+VF G TS + L+ + ++ +M +G+ILTPIY Sbjct: 301 KRKIAYSSISHMGFVLIGLASFTDLGMSGAMLQMISHGLIGASLFFMVGATYDRTHTLMLDEMGGIGQKMKKGFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYNLVFRTIVVVLMGVGVILTPIY 431 HSP 2 Score: 122.865 bits (307), Expect = 8.150e-68 Identity = 67/141 (47.52%), Postives = 83/141 (58.87%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T ++ + + PV L+ VKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+N+G+LP AH++F+P +I+G V IIYAA TS QRNLK+K Sbjct: 164 ATKFILYTAGGSLFILLAGLTLAFYG-DVNTFDMSAIAAKDIPVNLQLLLYAGFLIAYGVKLPIFPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALLRMNVGMLPDAHAVFAPVLVILGVVNIIYAAFTSFAQRNLKRK 303
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_GLOVI (NAD(P)H-quinone oxidoreductase chain 4 OS=Gloeobacter violaceus GN=ndhD PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.063e-67 Identity = 75/131 (57.25%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+GS+++ G+ GA+LQ+ISHGLI A+LFFL G +YDR L EMGG+A +PKIF +F+ SMASLALPGMSGFVAEL+VF G+ T+ + K ++ A G+ILTPIY Sbjct: 299 KRKIAYSSISHMGFVLIGVGSLSEIGMGGAMLQMISHGLIGASLFFLVGATYDRTHTLILSEMGGIAPKMPKIFAMFTACSMASLALPGMSGFVAELMVFVGMATTDAYSFQFKALVVLFAAFGVILTPIY 429 HSP 2 Score: 117.472 bits (293), Expect = 1.063e-67 Identity = 67/141 (47.52%), Postives = 79/141 (56.03%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA T N+ L ++Y + AVKLPI P HTWLPD HGEA MLLAGILLKMG Y LIR+N+G P A +F+P +++G V IIYAA TS GQRNLK+K Sbjct: 162 ATKFILYTAVGSLFILVVGLAMYFYGDLR-TFNMVELAAKNYDPTFQNLCFLGLLIAYAVKLPIFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVGFFPEATQLFAPLLIVLGIVNIIYAALTSFGQRNLKRK 301
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNP2 (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.063e-67 Identity = 75/131 (57.25%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+ S TD G +GA+LQ+ISHGLI A+LFF+ G +YDR LDEMGG+ + KIF +++ SMASLALPGMSGFVAEL+VF G TS + +++I F+ A+G+ILTPIY Sbjct: 303 KRKIAYSSISHMGFVLIGMASFTDLGTSGAMLQMISHGLIGASLFFMVGATYDRTHTLMLDEMGGVGKKMKKIFAMWTTCSMASLALPGMSGFVAELMVFVGFATSDAYSPTFRVIIVFLAAVGVILTPIY 433 HSP 2 Score: 119.398 bits (298), Expect = 1.063e-67 Identity = 64/141 (45.39%), Postives = 81/141 (57.45%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T ++ + + + + L+ VKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+N G+LP AH++F P +I+G V I+YAA TS QRNLK+K Sbjct: 166 ATKFILYTAGGSLFILIAALTMAFYG-DTVTFDMTAIAQKDFGINLQLLLYGGLLIAYGVKLPIFPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALLRMNAGMLPDAHALFGPVLVILGVVNIVYAALTSFAQRNLKRK 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNP6 (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.007e-67 Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+GS T GL+G++LQ++SHGLI A+LFFL G +YDR LDEMGG+ + K+F +++ +MASLALPGMSGFVAEL+VF G TS + L K+V+ + AIG+ILTPIY Sbjct: 305 KRKIAYSSISHMGFVLIGLGSFTQLGLSGSMLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTTCAMASLALPGMSGFVAELMVFVGFATSDAYGLPFKVVVISLAAIGVILTPIY 435 HSP 2 Score: 118.627 bits (296), Expect = 4.007e-67 Identity = 64/141 (45.39%), Postives = 81/141 (57.45%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + + +TL + Y + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L R+N G+LP AH+ F+P +++G V I+YAA TS QRNLK+K Sbjct: 168 ATKFILYTAGSSLFILVASLAMAFSG-DVISFDFQTLAAKEYAIGFQLLLYAGFLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALFRMNAGMLPEAHARFAPILVLLGVVNILYAALTSFAQRNLKRK 307
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNE7 (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus elongatus (strain PCC 7942) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.007e-67 Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++G+GS T GL+G++LQ++SHGLI A+LFFL G +YDR LDEMGG+ + K+F +++ +MASLALPGMSGFVAEL+VF G TS + L K+V+ + AIG+ILTPIY Sbjct: 305 KRKIAYSSISHMGFVLIGLGSFTQLGLSGSMLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTTCAMASLALPGMSGFVAELMVFVGFATSDAYGLPFKVVVISLAAIGVILTPIY 435 HSP 2 Score: 118.627 bits (296), Expect = 4.007e-67 Identity = 64/141 (45.39%), Postives = 81/141 (57.45%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + + + +TL + Y + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L R+N G+LP AH+ F+P +++G V I+YAA TS QRNLK+K Sbjct: 168 ATKFILYTAGSSLFILVASLAMAFSG-DVISFDFQTLAAKEYAIGFQLLLYAGFLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALFRMNAGMLPEAHARFAPILVLLGVVNILYAALTSFAQRNLKRK 307
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C3_SYNP2 (NAD(P)H-quinone oxidoreductase chain 4 3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhD3 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 5.225e-67 Identity = 73/131 (55.73%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSSVSHMGF+++GI S TD G+NGA+LQ++SHGLI++ LFFLAG +YDR + L E+GGL +PK+F +F++ ++ASLALPGMSGFV EL VF G+ +S + + + F+ A+G+ILTPIY Sbjct: 303 KRRLAYSSVSHMGFVLIGIASFTDLGINGAMLQMLSHGLIASVLFFLAGVTYDRTKTMVLAEVGGLGQVMPKVFAMFTVGALASLALPGMSGFVGELSVFVGLASSDTYSATFRTITVFLAAVGVILTPIY 433 HSP 2 Score: 118.242 bits (295), Expect = 5.225e-67 Identity = 61/141 (43.26%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 A KF+LYTA P +L + + YP+ L+ VKL I P HTWLPD HGEA MLLAG+LLKMG YGL+R NM LLP AH F+P +I+G V I+Y A +S GQ N+K++ Sbjct: 165 AMKFLLYTAAASIFILVAALALSLNLPGGPNFDLGAIAQQDYPLGLQMWLYAGLLVSFGVKLAIFPLHTWLPDAHGEASSPVSMLLAGVLLKMGGYGLMRFNMELLPDAHVRFAPLLVILGVVNIVYGAFSSFGQTNMKRR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_SYNP2 (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.159e-66 Identity = 73/131 (55.73%), Postives = 99/131 (75.57%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+A SS+SHMGF+++GI S TD G+NGAVLQ++SHG I+AALFFL+G +Y+R +DEM G+A +PK F +F+ +MASLALPGMSGFV+EL VF G+ S + K + F+ A+G+ILTPIY Sbjct: 303 KRRLASSSISHMGFVLVGIASFTDLGMNGAVLQMLSHGFIAAALFFLSGVTYERTHTLMMDEMSGIARLMPKTFAMFTAAAMASLALPGMSGFVSELTVFLGLSNSDAYSYGFKAIAIFLTAVGVILTPIY 433 HSP 2 Score: 120.939 bits (302), Expect = 1.159e-66 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + T +++ L + YP+ALE VKLPI P HTWLPD H EA M+LAG+LLKMG YGLIR+NM +LP AH F+P +++G V I+Y A T+ GQ NLK++ Sbjct: 166 ATKFILYTALGSVFILASTLALAFYG-GDVTFDMQALGLKDYPLALELLAYAGFLIGFGVKLPIFPLHTWLPDAHSEASAPVSMILAGVLLKMGGYGLIRLNMEMLPDAHIRFAPLLIVLGIVNIVYGALTAFGQTNLKRR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROMA (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus GN=ndhD PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.368e-66 Identity = 74/131 (56.49%), Postives = 103/131 (78.63%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ+ISHGLI A+LFFL G +YDR L+EMGG+ + +F L+++ S+ASLALPGMSGFV+EL+VF G++T + + L +IVI + AIG+ILTPIY Sbjct: 324 KRKIAYSSISHMGFVLIGIGSFSTLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLQLNEMGGVGQKMRIMFALWTVCSLASLALPGMSGFVSELMVFAGLVTDEVYTLPFRIVIAGLAAIGVILTPIY 454 HSP 2 Score: 119.783 bits (299), Expect = 4.368e-66 Identity = 64/141 (45.39%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA P L N+ + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 186 ATKFIIYTAGSSLFILLAGLAMGFFGGGAPNFEFTHLANQQFGTGFQLLCYGGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 326 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |