CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_ANAVT (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.377e-64 Identity = 76/131 (58.02%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSSVSHMGF++LGI S TD G++GA+LQ++SHGLI+A LFFLAG +YDR +D +GG+ +PK+F LF+ +MASLALPGMSGFV+EL VF G+ TS + V+ F+ A+G+ILTPIY Sbjct: 303 KRRLAYSSVSHMGFVLLGIASFTDVGVSGAMLQMLSHGLIAAVLFFLAGVTYDRTHTMAMDNLGGIGQAMPKVFALFTAGTMASLALPGMSGFVSELKVFIGVTTSDIYSPTFCTVMVFLAAVGVILTPIY 433 HSP 2 Score: 110.538 bits (275), Expect = 1.377e-64 Identity = 60/141 (42.55%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKF+LYTA N T ++ L ++YP+ALE VKL I P HTWLPD HGEA M+LAG+LLKMG YGLIR+N+ LLP AH F+P +G + IIY S Q ++K++ Sbjct: 166 ATKFLLYTAAASIFILIAGLAMALHGDNT-TFDIVELGAKNYPLALELLLYAGLLIAFGVKLAIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLELLPDAHIYFAPVLATLGVINIIYGGLNSFAQTHMKRR 305
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNY3 (NAD(P)H-quinone oxidoreductase chain 4-2 OS=Synechocystis sp. (strain PCC 6803) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.795e-64 Identity = 74/131 (56.49%), Postives = 100/131 (76.34%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSSVSHMGF++LGI S TD G++GA+LQ++SHGLI+A LFFLAG +YDR L +MG + +P +F LF++ +MASLALPGMSGFV+EL VF G+ +S + K V F+ A+G++LTPIY Sbjct: 302 KRRLAYSSVSHMGFVLLGIASFTDLGISGAMLQMLSHGLIAAVLFFLAGVTYDRTHTLSLAQMGNIGKVMPTVFALFTMGAMASLALPGMSGFVSELAVFVGVSSSDIYSTPFKTVTVFLAAVGLVLTPIY 432 HSP 2 Score: 113.62 bits (283), Expect = 1.795e-64 Identity = 62/141 (43.97%), Postives = 79/141 (56.03%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 A KF+LYTA + T ++ L + YP+ALE VKL I PFHTWLPD HGEA M+LAG+LLKMG YGLIR+N+GLL AH F+P +I+G V IIY +S Q N+K++ Sbjct: 165 AMKFLLYTAAASVFILVAALGLAFYG-DVTTFDIAELGLKDYPIALELFLYAGLLIAFGVKLAIFPFHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLGLLEDAHVYFAPILVILGVVNIIYGGFSSFAQDNMKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_SYNS9 (NAD(P)H-quinone oxidoreductase chain 4 OS=Synechococcus sp. (strain CC9902) GN=ndhD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.052e-64 Identity = 69/131 (52.67%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ+ISHGLI A+LFFL G +YDR LDEMGG+ + +F L+++ ++ASLALPGMSGFV+EL++F G T + + L ++VI + A+G++LTP+Y Sbjct: 316 KRKIAYSSISHMGFVLIGIGSFSVLGSSGAMLQMISHGLIGASLFFLVGATYDRTHTLLLDEMGGIGQKMRIMFALWTVCALASLALPGMSGFVSELMIFAGFATDEAYTLPFRVVICGLAAVGVVLTPVY 446 HSP 2 Score: 117.857 bits (294), Expect = 3.052e-64 Identity = 64/141 (45.39%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA P+ L + + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 178 ATKFILYTAGSSLFILLAALAMGFFGGGTPSFEYTALAAKDFGSGFQLLCYAGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNCELLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 318
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROMS (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain AS9601) GN=ndhD PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.151e-63 Identity = 71/131 (54.20%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR + LDEM G+ + +F L++ S+ASLALPGMSGFV+EL+VF G +T + + L ++V+ + AIG+ILTPIY Sbjct: 311 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVVMASLAAIGVILTPIY 441 HSP 2 Score: 115.161 bits (287), Expect = 1.151e-63 Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA + P L + + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 173 ATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFSQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPVAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROM2 (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain MIT 9215) GN=ndhD PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.151e-63 Identity = 71/131 (54.20%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR + LDEM G+ + +F L++ S+ASLALPGMSGFV+EL+VF G +T + + L ++V+ + AIG+ILTPIY Sbjct: 311 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVVMASLAAIGVILTPIY 441 HSP 2 Score: 115.161 bits (287), Expect = 1.151e-63 Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA + P L + + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 173 ATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFSQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPVAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROM9 (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=ndhD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.151e-63 Identity = 70/131 (53.44%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR + LDEM G+ + +F L++ S+ASLALPGMSGFV+EL+VF G +T + + L ++++ + AIG+ILTPIY Sbjct: 311 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGVILTPIY 441 HSP 2 Score: 115.546 bits (288), Expect = 1.151e-63 Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA + P L + + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 173 ATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFTQKFQILCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPAAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROM0 (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain MIT 9301) GN=ndhD PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.501e-63 Identity = 71/131 (54.20%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR + LDEM G+ + +F L++ S+ASLALPGMSGFV+EL+VF G +T + + L ++V+ + AIG+ILTPIY Sbjct: 308 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMSGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVVMASLAAIGVILTPIY 438 HSP 2 Score: 114.775 bits (286), Expect = 1.501e-63 Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA + P L + + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 170 ATKFIIYTAGSSIFILLAALAMGFYGTEIPNFEFSHLAAQDFNQKFQIFCYVGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPVAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 310
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROMT (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain NATL2A) GN=ndhD PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.656e-63 Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR LDEMGG+ + +F L++ + ASLALPGMSGF++EL+VF G +T + + L +IV+ + AIG+ILTPIY Sbjct: 311 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTHTLQLDEMGGIGQNMRIMFALWTACAFASLALPGMSGFISELMVFVGFVTDEVYTLPFRIVVASLAAIGVILTPIY 441 HSP 2 Score: 111.694 bits (278), Expect = 5.656e-63 Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNE-PTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA P L +++ + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 172 ATKFIIYTAGSSLFILLAGLAMGFFQGGGMPDFGYTHLAQQNFGKGFQLLCYSGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PROM1 (NAD(P)H-quinone oxidoreductase chain 4 OS=Prochlorococcus marinus (strain NATL1A) GN=ndhD PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.375e-63 Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + G +GA+LQ++SHGLI A+LFFL G +YDR LDEMGG+ + +F L++ + ASLALPGMSGF++EL+VF G +T + + L +IV+ + AIG+ILTPIY Sbjct: 311 KRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTHTLQLDEMGGIGQNMRIMFALWTACAFASLALPGMSGFISELMVFVGFVTDEVYTLPFRIVVASLAAIGVILTPIY 441 HSP 2 Score: 111.309 bits (277), Expect = 7.375e-63 Identity = 63/142 (44.37%), Postives = 76/142 (53.52%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNE-PTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFI+YTA P L +++ + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L+R N LLP AH+ F+P +++G V IIYAA TS QRNLK+K Sbjct: 172 ATKFIIYTAGSSLFILLAGLAMGFFQGGGVPDFGYTHLAQQNFGRGFQLLCYSGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRK 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_SYNR3 (NAD(P)H-quinone oxidoreductase chain 4 OS=Synechococcus sp. (strain RCC307) GN=ndhD PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.779e-62 Identity = 74/131 (56.49%), Postives = 98/131 (74.81%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K++IAYSS+SHMGF+++GIGS + +GA+LQ+ISHGLI A+LFFL G +YDR LDEMGG+ + K+F +++ S+ASLALPGMSGFV+EL+VF G T + L +IVI AIG+ILTPIY Sbjct: 328 KRKIAYSSISHMGFVLIGIGSFSPLAASGAMLQMISHGLIGASLFFLVGATYDRTHTLQLDEMGGVGQRMRKMFAMWTACSLASLALPGMSGFVSELMVFVGFATDDAYTLPFRIVIDGAAAIGVILTPIY 458 HSP 2 Score: 110.153 bits (274), Expect = 2.779e-62 Identity = 61/141 (43.26%), Postives = 71/141 (50.35%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + L + + VKLPI+P HTWLPD HGEA MLLAGILLKMG Y L R N + P AH F+P +++G V IIYAA TS QRNLK+K Sbjct: 190 ATKFILYTAVSSLFILLVALAMAFSGGGPVSFEYSDLAAKHLGAGFQALCYAGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALFRFNASMFPDAHVQFAPLLVVLGVVNIIYAALTSFAQRNLKRK 330 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |