CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUOM_PSEAE (NADH-quinone oxidoreductase subunit M OS=Pseudomonas aeruginosa GN=nuoM PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.748e-37 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K+ +AYSSVSHMGF+++GI S + L G V+Q+I+HGL +AALF L G Y+R+ + +MGGL +P + + + ASL LPG FV E ++ G F ++P I++ + G++ +YS Sbjct: 314 KRLVAYSSVSHMGFVMIGIYSGSQVALQGVVVQMIAHGLSAAALFILCGQLYERLHTRDMRKMGGLWSRMPYLPAISLFFASASLGLPGTGNFVGEFLILIG-----AFKVVPVIIV--IATFGLVFASVYS 438 HSP 2 Score: 77.411 bits (189), Expect = 5.748e-37 Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = -1 Query: 394 ATKFILYTAXXXXXXXXXXXXXXXXXSNEP---TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 813 ATKF ++T N T + TL+ +E AVK+P++P H+WLPD H +A + + LAGILLK AYGLIR + L P+A + F+P M +G + I Y A S Q ++K+ Sbjct: 173 ATKFFIFTQASGLVMLVAILGLVFVNFNATGVITFDYATLLKTQLSPHVEWLLMLGFFVAFAVKMPVVPVHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLIRFALPLFPNASAEFAPIAMWLGIIGIFYGALLSFAQTDIKR 315
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUOM_ECOLI (NADH-quinone oxidoreductase subunit M OS=Escherichia coli (strain K12) GN=nuoM PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.271e-36 Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K+ IAY+SVSHMGF+++ I + + GAV+Q+I+HGL +A LF L G Y+RI + MGGL + + L ++A+L +PG FV E ++ FG F ++P VIT + G++ +YS Sbjct: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG-----SFQVVP--VITVISTFGLVFASVYS 436 HSP 2 Score: 82.0333 bits (201), Expect = 1.271e-36 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = -1 Query: 394 ATKFILYTAXXXXXXXXXXXXXXXXXSNEP---TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 813 ATKF +YT N T N E L+N +E AVK+P++P H WLPD H +A + + LAGILLK AYGL+R ++ L P+A + F+P M +G + I Y A + Q ++K+ Sbjct: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUOM_ECO57 (NADH-quinone oxidoreductase subunit M OS=Escherichia coli O157:H7 GN=nuoM PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.271e-36 Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K+ IAY+SVSHMGF+++ I + + GAV+Q+I+HGL +A LF L G Y+RI + MGGL + + L ++A+L +PG FV E ++ FG F ++P VIT + G++ +YS Sbjct: 312 KRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFG-----SFQVVP--VITVISTFGLVFASVYS 436 HSP 2 Score: 82.0333 bits (201), Expect = 1.271e-36 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = -1 Query: 394 ATKFILYTAXXXXXXXXXXXXXXXXXSNEP---TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 813 ATKF +YT N T N E L+N +E AVK+P++P H WLPD H +A + + LAGILLK AYGL+R ++ L P+A + F+P M +G + I Y A + Q ++K+ Sbjct: 171 ATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKR 313
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C3_ANAVT (NAD(P)H-quinone oxidoreductase chain 4 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhD3 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.499e-36 Identity = 70/131 (53.44%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSS++HMGF+++G+ S T+ G++GAVLQ++SHGL++A+LFFL G +Y+R +D+MGG+ +PK F L++ +MASLALPGMSGFV EL+VF GI TS + K+V+ + A+G+ILTPIY Sbjct: 303 KRRLAYSSIAHMGFVLIGLASYTEIGVSGAVLQMVSHGLVAASLFFLTGVTYERTHTLLMDKMGGIGKVMPKTFALYTAGAMASLALPGMSGFVGELMVFIGIATSDVYSSSFKVVVVLLSAVGVILTPIY 433 HSP 2 Score: 110.923 bits (276), Expect = 8.587e-24 Identity = 63/152 (41.45%), Postives = 79/152 (51.97%), Query Frame = -1 Query: 358 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKKNSLFLCISYGF 813 ATKFILYTA + T ++ L + YP A+E VKLPI P HTWLPD HGEA M+LAG+LLKMG Y LIR N+ +LP AH F+P I+G V I+Y A + Q NLK++ + GF Sbjct: 166 ATKFILYTAAASIFILVAGFALAFSG-DTVTFDIAALGMKEYPKAIELLAYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPGSMILAGVLLKMGGYALIRFNIEMLPDAHVYFAPVLAILGVVNIVYGACCAFAQTNLKRRLAYSSIAHMGF 316
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_SYNJB (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Synechococcus sp. GN=ndhD1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.499e-36 Identity = 75/131 (57.25%), Postives = 99/131 (75.57%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSS++HMGF+++GI + T+ G+NGAVLQ+ISHGLI+A LFFL G +Y+R LD++GGLA +PK F LF+ S+ASLALPGMSGFV EL VF G+ TS + K I + A+G+ILTPIY Sbjct: 302 KRRLAYSSIAHMGFVLIGISAFTELGINGAVLQMISHGLIAAVLFFLTGITYERTHTLALDKLGGLAKQMPKAFALFTAGSLASLALPGMSGFVGELTVFLGLTTSDAYAPTFKAGIALLAAVGIILTPIY 432 HSP 2 Score: 115.161 bits (287), Expect = 4.553e-25 Identity = 65/152 (42.76%), Postives = 82/152 (53.95%), Query Frame = -1 Query: 358 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKKNSLFLCISYGF 813 ATKFILYTA +L + L +SYP+ALE VKLPI P HTWLPD H EA M+LAG+LLKMG YGLIR+N+G+L AH F+P ++G V IIY A + GQ +LK++ + GF Sbjct: 165 ATKFILYTAAASIFILVGSLAMAFYGEGF-SLEMAELSAKSYPLALELLAYAALLIAFGVKLPIFPLHTWLPDAHSEASAPISMILAGVLLKMGGYGLIRMNVGMLSEAHVYFAPVLAVLGVVNIIYGALAAFGQNHLKRRLAYSSIAHMGF 315
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_MARPO (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.656e-36 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KK IAYSSV+HM F+ +G+ S+ G+ G++L ++SHGL+S+ALF G YDR + + GGL +P T+F ++A+++LPG S F+ E ++ G ++ + A+GMIL YS Sbjct: 305 KKIIAYSSVAHMNFVTIGMFSLNIQGIEGSILLMLSHGLVSSALFLCVGALYDRHKTRIVKYYGGLVSTMPIFSTIFLFFTLANMSLPGTSSFIGEFLILVGAFQRNS-------LVATLAALGMILGAAYS 429 HSP 2 Score: 75.8702 bits (185), Expect = 1.656e-36 Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 394 TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 723 T +L+ L+ + + +VK+P++P H WLP+ H EA + ++LAGILLK+G YG +R ++ + P A F+P+ + + IIY + T+ Q +LKK Sbjct: 197 TTDLQILLTTEFSERRQILLWIAFFASFSVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLYFTPFIYTLSVIAIIYTSLTTIRQIDLKK 306
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C1_ANASP (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Anabaena sp. (strain PCC 7120) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.958e-36 Identity = 70/131 (53.44%), Postives = 102/131 (77.86%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+R+AYSS++HMGF+++G+ S T+ G++GAVLQ++SHGL++A+LFFL G +Y+R +D+MGG+ +PK F L++ +MASLALPGMSGFV EL+VF GI TS + K+V+ + A+G+ILTPIY Sbjct: 304 KRRLAYSSIAHMGFVLIGLASYTEIGVSGAVLQMVSHGLVAASLFFLTGVTYERTHTLLMDKMGGIGKIMPKTFALYTAGAMASLALPGMSGFVGELMVFIGIATSDVYSSSFKVVVVLLSAVGVILTPIY 434 HSP 2 Score: 112.464 bits (280), Expect = 2.951e-24 Identity = 64/152 (42.11%), Postives = 79/152 (51.97%), Query Frame = -1 Query: 358 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKKNSLFLCISYGF 813 ATKFILYTA + T ++ L + YP A+E VKLPI P HTWLPD HGEA M+LAG+LLKMG Y LIR NM +LP AH F+P I+G V I+Y A + Q NLK++ + GF Sbjct: 167 ATKFILYTAAASIFILVAGFALAFSG-DTVTFDIAALGMKEYPKAIELLAYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPGSMILAGVLLKMGGYALIRFNMEMLPDAHVYFAPVLAILGVVNIVYGACCAFAQTNLKRRLAYSSIAHMGF 317
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NQO13_PARDE (NADH-quinone oxidoreductase chain 13 OS=Paracoccus denitrificans GN=nqo13 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.156e-36 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KK IAYSSV+HMG++ +G+ + G++GA+ Q++SHG IS ALF G YDR+ +D GGL +P +F +MA++ LPG SGFV E + G+ + + V G+IL+ Y+ Sbjct: 310 KKVIAYSSVAHMGYVTMGVFAANQIGVDGAIFQMLSHGFISGALFLCVGVIYDRMHTREIDAYGGLVNRMPAYAAVFMFFTMANVGLPGTSGFVGEFLTLMGVFRVDTW-------VALVATSGVILSAAYA 434 HSP 2 Score: 72.0182 bits (175), Expect = 2.156e-36 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = -1 Query: 394 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 636 VK+P+ P HTWLPD H +A + +LLA +LLKMG YG +R ++ + P A + P+ + + I+Y + + Q ++KK Sbjct: 231 VKMPMWPVHTWLPDAHVQAPTAGSVLLAAVLLKMGGYGFLRFSLPMFPVASGVAQPYVFWLSAIAIVYTSLVALAQSDMKK 311
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PROWI (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii GN=ND4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.764e-36 Identity = 52/132 (39.39%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KK IAYSSV+HM F+ +G+ S G+ G++L +ISHGL+S ALF G YDR + L G +P LF +MA+++LPG S F E +VF G + F + F A GM+L Y+ Sbjct: 336 KKIIAYSSVAHMNFVTIGLFSQNTQGIEGSILLMISHGLVSPALFLCVGVLYDRHKTRLLRYYSGCGQTMPIFALLFVFFTMANISLPGTSSFPGEFLVFIGSYQNNSF-------VAFCAATGMVLGAAYA 460 HSP 2 Score: 76.6406 bits (187), Expect = 4.764e-36 Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 394 TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 723 TL++E L + + AVK+P++P H WLP+ H EA + ++LAGILLK+G YG +R ++ L P+A F+P + + I+Y + T+ Q +LKK Sbjct: 228 TLDIEMLYLSDFSETRQCILWLAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVIAIVYTSCTTIRQIDLKK 337
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_WHEAT (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.767e-36 Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 KK IAYSSV+HM + +G+ S+ G+ G++L ++SHGL+S+ALF G YDR + + GGL +P T+F ++A+++LPG S F+ E ++ G ++ + A+GMIL YS Sbjct: 305 KKIIAYSSVAHMNLVTIGMFSLNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNS-------LVATLRALGMILGAAYS 429 HSP 2 Score: 75.8702 bits (185), Expect = 4.767e-36 Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 394 TLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 723 T +L+ L+ + + AVK+P++P H WLP+ H EA + ++LAGILLK+G YG +R ++ + P A F+P+ + + IIY + T+ Q +LKK Sbjct: 197 TTDLQILLTTEFSERRQILLWIAFFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKK 306 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |