CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_SCYCA (NADH-ubiquinone oxidoreductase chain 4 OS=Scyliorhinus canicula GN=MTND4 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.386e-24 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG + I T GA+ +I+HGL+S+ALF LA T+Y+RI L G+ + +P + T + + ++A+LALP V EL++ + + ++ + IG+++T YS Sbjct: 284 KSMIAYSSVSHMGLVAGAILIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERIHSRTLLLARGVQVILPLMATWWLLANLANLALPPSPNLVGELLIISSLFNWSNWTIL-------LTGIGVLITASYS 408 HSP 2 Score: 55.4546 bits (132), Expect = 1.386e-24 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI + L P + P F+I+ I+ +S Q +LK Sbjct: 206 VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIIIMLNPITKEMAYP-FIILAIWGIVMTSSICLRQTDLK 284
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_RAT (NADH-ubiquinone oxidoreductase chain 4 OS=Rattus norvegicus GN=Mtnd4 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.348e-24 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I I T GA + +I+HGL S+ LF LA T+Y+RI + GL + P + T + + S+A+LALP + + EL + + + P I++ MA +++T +YS Sbjct: 283 KSLIAYSSVSHMALVITAIMIQTPWSFMGATMLMIAHGLTSSLLFCLANTNYERIHSRTMIMARGLQMIFPLMATWWLLASLANLALPPLINLMGELFIVMATFS----WSNPSIIL---MATNIVITGMYS 407 HSP 2 Score: 56.9954 bits (136), Expect = 2.348e-24 Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K+P+ H WLP H EA + M+LA ILLK+G YG++R+++ L P S+ P F+I+ +I +S Q +LK Sbjct: 205 IKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRVSIILDPLTKSLAYP-FIILSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ZAGBR (NADH-ubiquinone oxidoreductase chain 4 OS=Zaglossus bruijni GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.055e-24 Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ T G GA +I+HGL S+ LF LA T+Y+R + + GL + +P + + + + S+ +L LP ++EL++ + F L+ ++ + ++T IYS Sbjct: 283 KSLIAYSSISHMGLVVAASLIQTPWGFMGATAMMIAHGLTSSMLFCLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLTNLGLPPTINLISELMIIVSTFSWSNFTLI-------LLGLNTVITAIYS 407 HSP 2 Score: 59.3066 bits (142), Expect = 3.055e-24 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ FH WLP H EA + M+LA ILLK+G YG++RI + L P + + P F+I+ T +I +S Q +LK Sbjct: 205 VKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKFMAYP-FIILATWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CARAU (NADH-ubiquinone oxidoreductase chain 4 OS=Carassius auratus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.976e-24 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG + GI T G +GA++ +I+HGL+S+ALF LA T+Y+R + GL I P + I ++A+LALP + + EL++ + + ++ + +G ++T YS Sbjct: 284 KSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQIIFPLTAVWWFIANLANLALPPLPNLMGELMIITTLFNWSPWTIL-------LTGLGTLITAGYS 408 HSP 2 Score: 54.6842 bits (130), Expect = 3.976e-24 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + + P F+I+ II S Q +LK Sbjct: 206 VKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVMLDPLSKELAYP-FIILALWGIIMTGSICLRQTDLK 284
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CANAL (NADH-ubiquinone oxidoreductase chain 4 OS=Candida albicans GN=NAD4 PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 5.173e-24 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK P++P HTWLP H E+ + MLLAG++LK+ Y +IR+ + L A +++P ++ + IIY + + Q +LK Sbjct: 188 VKTPLVPVHTWLPVVHSESPLAGSMLLAGVILKLAVYAIIRLIIPTLSDATVLYTPVVYVICAITIIYTSIITLRQTDLK 267 HSP 2 Score: 64.6994 bits (156), Expect = 5.173e-24 Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = -2 Query: 87 IAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFL-AGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 389 +AYSS+SHM ILGI S + G+NG+++ ++HG +S ALF + G YDR + GL +P + ILS +++ P F+ EL+ G I Sbjct: 270 VAYSSISHMAVCILGILSNSLAGINGSLILSLAHGFVSPALFIIVGGILYDRYHHRLIYYYQGLLTYMPILAIYLLILSFSNIGTPLTVNFIGELLSLTGAI 371
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_SQUAC (NADH-ubiquinone oxidoreductase chain 4 OS=Squalus acanthias GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.174e-24 Identity = 44/132 (33.33%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG + I T GA+ +I+HGL+S+ALF LA T+Y+R L G+ + +P + T + I ++A+LALP + EL++ + + ++ + +G+++T YS Sbjct: 284 KSLIAYSSVSHMGLVAGAIMIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERTHSRTLLLARGIQVMLPLMATWWFIANLANLALPPTPNLMGELLIISSLFNWSSWTIL-------LTGLGVLITASYS 408 HSP 2 Score: 55.8398 bits (133), Expect = 5.174e-24 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI + L P + P F+I+ +I +S Q +LK Sbjct: 206 VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIIVMLNPLTKEMAYP-FLILAIWGVIMTSSICLRQTDLK 284
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_MOUSE (NADH-ubiquinone oxidoreductase chain 4 OS=Mus musculus GN=Mtnd4 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-24 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I I T GA + +I+HGL S+ LF LA ++Y+RI + GL + P + T + + S+A+LALP + EL + + + F ++ +M I +I+T +YS Sbjct: 283 KSLIAYSSVSHMALVIASIMIQTPWSFMGATMLMIAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTII-------LMGINIIITGMYS 407 HSP 2 Score: 55.4546 bits (132), Expect = 6.733e-24 Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K+P+ H WLP H EA + M+LA ILLK+G+YG+IRI++ L P + P F+++ +I +S Q +LK Sbjct: 205 IKMPLYGVHLWLPKAHVEAPIAGSMILAAILLKLGSYGMIRISIILDPLTKYMAYP-FILLSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TACAC (NADH-ubiquinone oxidoreductase chain 4 OS=Tachyglossus aculeatus aculeatus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.733e-24 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG ++ T G GA +I+HGL S LF LA T+Y+R + + GL + +P + + + + S+A+L LP ++EL++ + L+ ++ + ++T IYS Sbjct: 283 KSLIAYSSVSHMGLVVAASLIQTPWGFMGATAMMIAHGLTSTMLFRLANTNYERAHSRTMVLIRGLQMVLPLMSSWWLLASLANLGLPPTINLISELMIIVSAFSWSNLTLI-------LLGLNTVITAIYS 407 HSP 2 Score: 59.3066 bits (142), Expect = 6.733e-24 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ FH WLP H EA + M+LA ILLK+G YG++RI + L P + + P F+I+ T +I +S Q +LK Sbjct: 205 VKMPLYGFHLWLPKAHVEAPIAGSMVLAAILLKLGGYGILRIIIILEPISKLMAYP-FIILATWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AVAUN (NADH-ubiquinone oxidoreductase chain 4 OS=Avahi unicolor GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.762e-24 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T G GA +I+HGL S+ LF LA ++Y+RI + GL +P T + + S+ +LALP + EL+V ITS F I + ++ + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILVQTPLGFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLTATWWLLASLNNLALPPSINLIGELLV---TITS---FSWSNITV-ILIGLNMLITALYS 407 HSP 2 Score: 57.7658 bits (138), Expect = 8.762e-24 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI M L P S+ P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILDPTTKSMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CROLA (NADH-ubiquinone oxidoreductase chain 4 OS=Crossostoma lacustre GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.483e-23 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -2 Query: 102 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIV 398 K IAYSSVSHMG + GI T G GA++ +I+HGL+S+ALF LA T+Y+R + GL + P + I ++A+LALP + + EL++ Sbjct: 284 KSLIAYSSVSHMGLVAGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFIANLANLALPPLPNLMGELMI 382 HSP 2 Score: 54.6842 bits (130), Expect = 1.483e-23 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + + P F+I+ II S Q +LK Sbjct: 206 VKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMVVLDPLSKELAYP-FIILALWGIIMTGSICLRQTDLK 284 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |