CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_MACRO (NADH-ubiquinone oxidoreductase chain 4 OS=Macropus robustus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.484e-23 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = -2 Query: 15 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKF---FLMPKIVITFVMAIGMILT 398 K IAYSSVSHMG +I+ + GA +I+HGL S+ LF LA T+Y+RI + GL + +P + T + + S+A+LALP + EL V + F L VIT + ++ M++T Sbjct: 283 KSLIAYSSVSHMGLVIVAALMQSTLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMCTWWLLASLANLALPPTINLLGELAVIISSFSWSHFSIILLGANTVITALYSLHMLIT 413 HSP 2 Score: 55.8398 bits (133), Expect = 1.484e-23 Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = -1 Query: 397 TLNLETLVNRSYPVALEXXXXXXXXXXXA---VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 723 TL++ TL+ P+ L VK+P+ H WLP H EA + M+LA ILLK+G YG++RI + P ++ P F+++ +I +S Q +LK Sbjct: 173 TLHILTLIMNPKPMELSMPNSILWYACTVAFMVKMPMYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRITILTQPITAHVYYP-FIVLSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AVACL (NADH-ubiquinone oxidoreductase chain 4 OS=Avahi cleesei GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.484e-23 Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T G GA +I+HGL S+ LF LA ++Y+RI + GL +P + T + + S+ +LALP + EL+V ITS F I + ++ + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILVQTPLGFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLMARGLQTLLPLMTTWWLLASLNNLALPPSINLIGELLV---TITS---FSWSNITV-ILIGLNMLITALYS 407 HSP 2 Score: 56.225 bits (134), Expect = 1.484e-23 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI + L P S+ P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITIILDPTTKSMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_DANRE (NADH-ubiquinone oxidoreductase chain 4 OS=Danio rerio GN=mt-nd4 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.930e-23 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSV HMG + GI T G GA++ +I+HGL S+ALF LA TSY+R + GL + +P + I ++A+LALP + + EL++ + F P +I + +G ++T YS Sbjct: 284 KSLIAYSSVGHMGLVAGGILIQTPWGFTGAIILMIAHGLTSSALFCLANTSYERTHSRTMILARGLQMVLPLATVWWFIANLANLALPPLPNLMGELMIITAL-----FNWSPWTII--ITGMGTLITANYS 408 HSP 2 Score: 53.1434 bits (126), Expect = 1.930e-23 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + + P F+I+ +I Q +LK Sbjct: 206 VKMPLYGMHLWLPKAHVEAPVAGSMILAAVLLKLGGYGMMRMMVMLDPLSKQLAYP-FIILALWGVIMTGLVCLRQTDLK 284
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_DIDMA (NADH-ubiquinone oxidoreductase chain 4 OS=Didelphis marsupialis virginiana GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.511e-23 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ + T GA + +++HGL S+ LF LA T+Y+RI + GL + +P + T + S+A+LALP + EL++ + F ++ ++ + ++T +YS Sbjct: 283 KSLIAYSSVSHMALVIIAALIQSTTSFMGATILMVAHGLTSSMLFCLANTNYERIHSRTMILARGLQLILPLMTTWWLTASLANLALPPTINLLGELMIITASFSWSNFSIL-------LLGLNTVITALYS 407 HSP 2 Score: 55.8398 bits (133), Expect = 2.511e-23 Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K+P+ H WLP H EA + M+LA ILLK+G YG++RI++ P + P F+I+ +I +S Q +LK Sbjct: 205 IKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRISLFTEPMTMHLLYP-FIILSMWGMIMTSSICMRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_MYXGL (NADH-ubiquinone oxidoreductase chain 4 OS=Myxine glutinosa GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.269e-23 Identity = 47/134 (35.07%), Postives = 78/134 (58.21%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDR--IRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG + I +++ G++GA + +I+HGL S+ALFFLA ++Y++ R L + +P+ ++ LF IL+ +LA+P F++E+ + FL + F +A+ M++T YS Sbjct: 283 KALIAYSSVSHMGLMTASIMTLSLWGMSGAFIMMIAHGLSSSALFFLANSNYEKTNTRTIILLRHTQMLLPLTSLWWLFIILT--NLAMPPSINFISEITIM------SSLFLWSPLTFPF-LALTMVITTTYS 407 HSP 2 Score: 53.1434 bits (126), Expect = 3.269e-23 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = -1 Query: 481 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHS 636 +K P+ FH WLP H EA + M LA ++LK+G YG+IR++ L+P HS Sbjct: 205 IKTPLYGFHLWLPKAHVEATIAGSMTLAALMLKLGGYGMIRLS--LMPFLHS 254
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_STRPU (NADH-ubiquinone oxidoreductase chain 4 OS=Strongylocentrotus purpuratus GN=ND4 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 4.252e-23 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 21 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMI 398 K IAYSSV HM + I S T G+NGA++ +++HGL+S+ALF LA T Y+R L GL + +P + ++ A+L LP + E+++ +I S +L P ++ F G I Sbjct: 286 KALIAYSSVGHMSIVAAAIFSETSWGMNGALMLMVAHGLVSSALFSLANTVYERSGTRTLAITRGLKLLLPLSTLWWLLMCAANLGLPPSPNLIGEILILSSLI-SWSVWLFP--IVGFAQVFGAI 408 HSP 2 Score: 53.9138 bits (128), Expect = 4.252e-23 Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = -1 Query: 445 LPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-------INMGLLPHAHSIFSPWFMIVGTV 630 LP+ FH WLP H EA + M+LA ILLK+G YGL+R I+M L A +F W ++ +V Sbjct: 209 LPVYGFHLWLPKAHVEAPVAGSMILAAILLKIGGYGLMRLIALFSTISMNALSLALIVFCTWGALITSV 277
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ASTPE (NADH-ubiquinone oxidoreductase chain 4 OS=Asterina pectinifera GN=ND4 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.252e-23 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = -2 Query: 87 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 398 K IAYSSV HM + GI S++ G+NGA+ +I+HGLIS+ALF LA Y+R L G + P + ++I +A+L LP + EL++ II Sbjct: 286 KALIAYSSVGHMSIVASGIFSLSLWGINGALTLMIAHGLISSALFCLANLLYERNGTRTLSITRGFKMVTPLLTLWWTITCVANLGLPPTPNLIGELLILVAII 389 HSP 2 Score: 55.8398 bits (133), Expect = 4.252e-23 Identity = 28/71 (39.44%), Postives = 39/71 (54.93%), Query Frame = -1 Query: 514 PTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR 726 P+++L + S P+ L +K+PI FH WLP H EA + M+LA ILLK+G YGL+R Sbjct: 178 PSIHLTNYIT-SLPITLTSIWWIFCFIAFIIKMPIYGFHLWLPKAHVEAPIAGSMILAAILLKLGGYGLLR 247
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CAPMR (NADH-ubiquinone oxidoreductase chain 4 OS=Caperea marginata GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.253e-23 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = -2 Query: 18 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII--TSQKFFLM-PKIVITFVMAIGMIL 398 K IAYSSVSHM +I I T GA +I+HGL S+ LF LA ++Y+RI + GL I +P + T + + S+ +LALP + EL+ I ++ FLM IVIT + ++ M++ Sbjct: 283 KSLIAYSSVSHMALVIAAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRIMILARGLQISLPLMATWWLLASLTNLALPPTINLIGELLTVMSIFSWSNPTIFLMGTNIVITALYSLYMLI 412 HSP 2 Score: 54.299 bits (129), Expect = 4.253e-23 Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITFMLDPLTEFMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_LEMCA (NADH-ubiquinone oxidoreductase chain 4 OS=Lemur catta GN=MT-ND4 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.200e-23 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA + +I+HGL S+ LF LA ++Y+RI + G+ +P + T + + S+ +LALP + EL V + F I I +M + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSFMGATILMIAHGLTSSMLFCLANSNYERIHSRTMLLARGIQTILPLMATWWLLASLTNLALPPSINLIGELFV------TMASFSWSNITI-ILMGLNMLITALYS 407 HSP 2 Score: 55.8398 bits (133), Expect = 7.200e-23 Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI M L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMILNPMTKYMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOVIN (NADH-ubiquinone oxidoreductase chain 4 OS=Bos taurus GN=MT-ND4 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.368e-23 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA +I+HGL S+ LF LA ++Y+RI + GL +P + T + + S+ +LALP + EL V + + +M + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSN-------ITIILMGVNMVITALYS 407 HSP 2 Score: 55.0694 bits (131), Expect = 9.368e-23 Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI + L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIML 264 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |