CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_RHIUN (NADH-ubiquinone oxidoreductase chain 4 OS=Rhinoceros unicornis GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.203e-21 Identity = 46/132 (34.85%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA +I+HGL S+ LF LA ++Y+R + GL +P + + + S+ +LALP V EL V +++S F + I +M +I+T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFV---VVSS---FSWSNLTI-ILMGTNIIITALYS 407 HSP 2 Score: 56.6102 bits (135), Expect = 2.203e-21 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA ILLK+G YG++RI M L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNPLTSHMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CANLU (NADH-ubiquinone oxidoreductase chain 4 OS=Canis lupus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.866e-21 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ + T GA +I+HGL S+ LF LA ++Y+RI + GL +P + + + S+ +LALP + EL V +++S F I I +M I + +T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLTNLALPPTINLIGELFV---VMSS---FSWSNITI-ILMGINITITALYS 407 HSP 2 Score: 55.0694 bits (131), Expect = 2.866e-21 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI L P + + P FM++ +I +S Q +LK Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITTLLNPLTNFMAYP-FMMLSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ELEMA (NADH-ubiquinone oxidoreductase chain 4 OS=Elephas maximus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.866e-21 Identity = 44/132 (33.33%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA+ +I+HGL S+ LF LA ++Y+RI + GL +P + + + S+ ++A P + EL++ I TS F + I F M + +++T +Y+ Sbjct: 283 KSLIAYSSVSHMALVIIAIMLQTPWSFMGALTLMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAAWWLLASLINMAPPPTINLIGELLI---ITTS---FSWSNLTI-FPMGLNVLITTMYT 407 HSP 2 Score: 56.225 bits (134), Expect = 2.866e-21 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA ILLK+G YG++RI + L P ++ P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITILLDPLTMHMYYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CERSI (NADH-ubiquinone oxidoreductase chain 4 OS=Ceratotherium simum GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.866e-21 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = -2 Query: 15 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLM---PKIVITFVMAIGMILT 398 K IAYSSVSHM +I+ + T GA +I+HGL S+ LF LA ++Y+R + GL +P + + + S+ +LALP V EL V + ++ I+IT + ++ M++T Sbjct: 283 KSLIAYSSVSHMALVIVAVLIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQTLLPLMAMWWLLASLTNLALPPTINLVGELFVVMSSFSWSNITIILMGTNIIITALYSLYMLIT 413 HSP 2 Score: 56.225 bits (134), Expect = 2.866e-21 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA ILLK+G YG++RI M L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRITMILNPLTSYMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CHICK (NADH-ubiquinone oxidoreductase chain 4 OS=Gallus gallus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-21 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = -2 Query: 45 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVIT 398 K IAYSSVSHMG +I T +GA++ +ISHGL S+ LF LA T+Y+R L GL +P + + + ++ ++ALP + +AEL + + + P I++T Sbjct: 283 KSLIAYSSVSHMGLVIAASMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILILTRGLQPLLPLMSVWWLLANLTNMALPPTTNLMAELTIMVALFN----WSSPTIILT 396 HSP 2 Score: 52.373 bits (124), Expect = 3.728e-21 Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK P+ H WLP H EA + MLLA +LLK+G YG++R+ + + P ++ + P+ + Sbjct: 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTLLMEPVSNFLHYPFLTL 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_HUMAN (NADH-ubiquinone oxidoreductase chain 4 OS=Homo sapiens GN=MT-ND4 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.728e-21 Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHM ++ I T GAV+ +I+HGL S+ LF LA ++Y+R + GL +P + + + S+A+LALP + EL V + L+ + + M++T +YS Sbjct: 283 KSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLL-------LTGLNMLVTALYS 407 HSP 2 Score: 54.6842 bits (130), Expect = 3.728e-21 Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + P F+++ +I +S Q +LK Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYP-FLVLSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_HALGR (NADH-ubiquinone oxidoreductase chain 4 OS=Halichoerus grypus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.849e-21 Identity = 42/131 (32.06%), Postives = 68/131 (51.91%), Query Frame = -2 Query: 15 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLM---PKIVITFVMAIGMILT 398 K IAYSSVSHM +I+ I T GA +I+HGL S+ LF LA ++Y+R + GL + +P + + + S+ +LALP + EL V + ++ I+IT + ++ M++T Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSVLFCLANSNYERTHSRTMILARGLQVLLPLMAAWWLLASLTNLALPPTINLIGELFVVMASFSWSNITIILMGTNIIITALYSLYMLIT 413 HSP 2 Score: 53.5286 bits (127), Expect = 4.849e-21 Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++RI L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITALLSPLTSFMAYPFMML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_RABIT (NADH-ubiquinone oxidoreductase chain 4 OS=Oryctolagus cuniculus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 4.849e-21 Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA +I+HGL S+ LF LA ++Y+RI + GL +P + + + S+ +LALP + EL++ + ++ +M +++T +YS Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERIHSRTMLLARGLQTILPLMAAWWLVASLTNLALPPTINLLGELLIIMASFSWSNLTII-------LMGTNVLITALYS 407 HSP 2 Score: 54.6842 bits (130), Expect = 4.849e-21 Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA ILLK+G YG++RI + L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLSPITDYMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_DUGDU (NADH-ubiquinone oxidoreductase chain 4 OS=Dugong dugon GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.849e-21 Identity = 40/132 (30.30%), Postives = 64/132 (48.48%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM +I+ I T GA +I+HGL S+ LF LA ++Y+R+ + GL +P + + + + +LALP + EL + + + ++ M M+LT Y+ Sbjct: 283 KSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSLLFCLANSNYERVHSRTMILARGLQTLLPLMAAWWLLACLTNLALPPTINLIGELFIILASFSWSNYTIL-------FMGFNMLLTASYT 407 HSP 2 Score: 56.225 bits (134), Expect = 4.849e-21 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA ILLK+G YG++RI + L P S+ P+ M+ Sbjct: 205 VKMPLYGIHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITILLDPLTKSMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PISOC (NADH-ubiquinone oxidoreductase chain 4 OS=Pisaster ochraceus GN=NAD4 PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 6.307e-21 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 21 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMI 398 K IAYSSV HM + GI +++ G+NGA +I+HGLIS++LF LA Y+R L G + P + + I + +L LP + EL++ +I + + I+IT G I Sbjct: 286 KALIAYSSVGHMSMVAAGIFTLSPWGINGATTLMIAHGLISSSLFCLANILYERNNTRTLAITRGFKLITPLLSLWWIITCVTNLGLPPTPNLIGELLIISSVI---NWNISSFIIITSATVFGAI 408 HSP 2 Score: 51.9878 bits (123), Expect = 6.307e-21 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = -1 Query: 505 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 636 +K+PI FH WLP H EA + M+LA ILLK+G YGL R + Sbjct: 207 IKMPIYGFHLWLPKAHVEAPIAGSMILAAILLKLGGYGLARTTL 250 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |