CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_DROYA (NADH-ubiquinone oxidoreductase chain 4 OS=Drosophila yakuba GN=mt:ND4 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.170e-20 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = -2 Query: 84 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIIT 398 K IAYSSV+HMG ++ G+ ++T GL G+ +I+HGL S+ LF LA SY+R+ + GL +P + + +LS A++A P + E+ + I++ Sbjct: 271 KALIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVS 375 HSP 2 Score: 53.1434 bits (126), Expect = 5.170e-20 Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = -1 Query: 511 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 636 VK+P+ H WLP H EA S M+LAGI+LK+G YGL+R+ Sbjct: 193 VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV 234
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ANOGA (NADH-ubiquinone oxidoreductase chain 4 OS=Anopheles gambiae GN=mt:ND4 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 5.170e-20 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = -2 Query: 84 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIIT 398 K IAYSSV+HMG ++ G+ ++T GL G+ +I+HGL S+ LF LA SY+R+ L GL +P + + +L ++A P + E+ + I++ Sbjct: 272 KALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVS 376 HSP 2 Score: 55.4546 bits (132), Expect = 5.170e-20 Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA S M+LAGILLK+G YGL+R+ LL + ++ W++ + V + + Q +LK Sbjct: 194 VKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLK 272
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PONPY (NADH-ubiquinone oxidoreductase chain 4 OS=Pongo pygmaeus GN=MT-ND4 PE=3 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 6.721e-20 Identity = 40/132 (30.30%), Postives = 65/132 (49.24%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM ++ I T GA +I+HGL S+ LF LA ++Y+R + GL +P + + + S+ +LALP + EL V + + ++ + + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITIL-------LTGLNMLITALYS 407 HSP 2 Score: 52.373 bits (124), Expect = 6.721e-20 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + P F+++ +I +S Q +LK Sbjct: 205 MKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTIILDPLTKHMAYP-FLVLSLWGMIMTSSICLRQTDLK 283
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ASPAM (NADH-ubiquinone oxidoreductase chain 4 OS=Aspergillus amstelodami GN=ND4 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 8.730e-20 Identity = 36/104 (34.62%), Postives = 54/104 (51.92%), Query Frame = -2 Query: 90 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLA-GTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGI 398 K+ IAYSSVSH +G S T G+ G++ ++HG +S+ LF A G YDR + G+A +P LF ILS+ + P F+ E + +G+ Sbjct: 298 KELIAYSSVSHAAVYSIGAFSNTIQGIEGSIALGLAHGFVSSGLFICAGGILYDRSSTRLITYYRGMAQVMPIFSVLFFILSLGNSGTPLTLNFIGEFMSLYGV 401 HSP 2 Score: 55.4546 bits (132), Expect = 8.730e-20 Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = -1 Query: 427 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAA 636 VK P+ +TWL H E+ S ++LAGI+LK+ YG+ R+ + LLP A ++ ++G + IIYA+ Sbjct: 219 VKTPVSFLNTWLLKAHVESPLSGSIILAGIVLKLSLYGIFRLILPLLPKASLNYTYIIYVIGVITIIYAS 288
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PELSU (NADH-ubiquinone oxidoreductase chain 4 OS=Pelomedusa subrufa GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.137e-19 Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K+P+ H WLP H EA + M+LAG+LLK+G YG+IR+ + L P S+ P FM + II Q +LK Sbjct: 206 IKMPLYGLHLWLPKAHVEAPIAGSMILAGVLLKLGGYGIIRVTLMLNPLTKSLSYP-FMTLSLWGIIMTGLICLRQTDLK 284 HSP 2 Score: 56.6102 bits (135), Expect = 1.137e-19 Identity = 39/132 (29.55%), Postives = 65/132 (49.24%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSV MG +I T + GA++ +I+HGL S+ LF LA T+Y+R L + +P + + + S+ ++ALP + EL + + F I I + +G +++ +YS Sbjct: 284 KSLIAYSSVGLMGLVISAALLQTPLSITGAIILMIAHGLSSSMLFCLANTNYERTHNRTLLLTHSMQTLLPLMTIWWLLASLMNMALPPTINLMGELTIIASL------FSWANITI-ILTGLGTLISALYS 408
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PONAB (NADH-ubiquinone oxidoreductase chain 4 OS=Pongo abelii GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.479e-19 Identity = 40/132 (30.30%), Postives = 65/132 (49.24%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHM ++ I T GA +I+HGL S+ LF LA ++Y+R + GL +P + + + S+ +LALP + EL V + + ++ + + M++T +YS Sbjct: 283 KSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITIL-------LTGLNMLITTLYS 407 HSP 2 Score: 51.2174 bits (121), Expect = 1.479e-19 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIPILNPLTKHMAYPFIML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PANTR (NADH-ubiquinone oxidoreductase chain 4 OS=Pan troglodytes GN=MT-ND4 PE=3 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 2.501e-19 Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAY SVSHM ++ I T GA++ +I+HGL S+ L LA ++Y+R + GL +P + + + S+A+LALP + EL V ++TS + ++ F M++T +YS Sbjct: 283 KSLIAYPSVSHMALVVTAILIQTPWSFTGAIILMIAHGLTSSLLSCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSV---LVTSFSWSNTTLLLTGF----NMLITALYS 407 HSP 2 Score: 53.9138 bits (128), Expect = 2.501e-19 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 VK+P+ H WLP H EA + M+LA +LLK+G YG++R+ + L P + P+ M+ Sbjct: 205 VKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLML 264
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_LUMTE (NADH-ubiquinone oxidoreductase chain 4 OS=Lumbricus terrestris GN=ND4 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.230e-19 Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = -2 Query: 87 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 398 K IAYSSV HMG ++ G ++ G A+ +I+HGL S+ALF +A +Y+ L M GL + P + + + + +++A P ++E+++ I+ Sbjct: 277 KSLIAYSSVGHMGLMVAGALMSSNWGFQAALAMMIAHGLSSSALFVMANMNYELTHTRSLFLMKGLLVLAPTLTMWWFLFTASNMAAPPSINLLSEIMLITSIL 380 HSP 2 Score: 53.9138 bits (128), Expect = 4.230e-19 Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = -1 Query: 418 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTS 636 VKLP+ H WLP H EA + M+LA ILLK+G YG++R +L H + ++ +V ++ A STS Sbjct: 199 VKLPMFTVHLWLPKAHVEAPIAGSMILAAILLKLGGYGILR----MLSLFHYMAKSTSSLLSSVALVGAVSTS 267
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_DROME (NADH-ubiquinone oxidoreductase chain 4 OS=Drosophila melanogaster GN=mt:ND4 PE=3 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 4.231e-19 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = -2 Query: 84 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIIT 398 K IAYSSV+HMG ++ G+ ++T GL G+ +I+HGL S+ LF LA SY+R+ + GL +P + + +LS A++A P + E+ + I++ Sbjct: 271 KALIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPSMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVS 375 HSP 2 Score: 50.0618 bits (118), Expect = 4.231e-19 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = -1 Query: 511 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 636 VK+P+ + WLP H EA S M+LAGI+LK+G YG++R+ Sbjct: 193 VKMPMFLVYLWLPKAHVEAPVSGSMILAGIMLKLGGYGMLRV 234
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PICCA (NADH-ubiquinone oxidoreductase chain 4 OS=Pichia canadensis GN=ND4 PE=3 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 5.487e-19 Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK P+ P HTWLP H E+ S ++LAGI++K+ Y +IR+ + L I++P +G + I Y + Q ++K Sbjct: 240 VKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIK 319 HSP 2 Score: 55.4546 bits (132), Expect = 5.487e-19 Identity = 38/122 (31.15%), Postives = 60/122 (49.18%), Query Frame = -2 Query: 30 IAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFL-AGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILS-MASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAI 389 IAYSS+ HM I+ I S G+ G++L I+HG S ALF L G YDR + LA +P IF+++ +++ + ++ +P F+ E + GI F + F+ I Sbjct: 322 IAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMP-IFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTI 442 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |