CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CERCA (NADH-ubiquinone oxidoreductase chain 4 OS=Ceratitis capitata GN=ND4 PE=3 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 5.503e-19 Identity = 39/132 (29.55%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSV+HMG ++ G+ +++ GL+G+ +I HGL S+ LF LA +Y+R+ L GL +P + + +LS+ ++A P + E+ + I++ ++ ++F A + YS Sbjct: 271 KALIAYSSVAHMGIVLGGLMTLSYWGLSGSYTLMIGHGLCSSGLFCLANITYERLGSRSLLINKGLLNFMPSMTLWWFLLSVCNMAAPPSLNLLGEISLLNSIVSWSWLTMISLSFLSFFSAAYTLYLYAYS 402 HSP 2 Score: 50.8322 bits (120), Expect = 5.503e-19 Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = -1 Query: 511 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 636 VK+P+ H WLP H EA S M+LAGI+LK+G YGL+ + Sbjct: 193 VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLAV 234
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ALBCO (NADH-ubiquinone oxidoreductase chain 4 OS=Albinaria coerulea GN=ND4 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.505e-19 Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = -2 Query: 33 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMA 398 K +AYSSV+HM + GI +++ A + +I+HG S+ALF LA SY +I+ L M GL P + + + S ++A P F+ EL++ + + L+ +I F+ A Sbjct: 265 KALVAYSSVAHMSLVSAGILMMSNWSYTCAKMTMIAHGYTSSALFVLANLSYLKIKSRSLMFMKGLLAIFPAMAFYWFLFSCMNMAAPPTLNFIGELLIIPSMYIASYMLLILMCIIMFISA 386 HSP 2 Score: 49.6766 bits (117), Expect = 5.505e-19 Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = -1 Query: 520 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGL 636 VKLPI H WLP H EA M+LAG+LLK+G YGL Sbjct: 186 VKLPIYTCHLWLPKAHVEAPLGGSMVLAGVLLKLGGYGL 224
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_LOCMI (NADH-ubiquinone oxidoreductase chain 4 OS=Locusta migratoria GN=ND4 PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 9.306e-19 Identity = 36/132 (27.27%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSV+HM +I G+ ++ G G++ +I HG+ S+ LF L+ Y+ + L G+ +P + + +LS +++A P + E + II+ + ++ I ++F A+ + YS Sbjct: 271 KSLIAYSSVAHMSLVICGLMTMNWWGCMGSLSLMIGHGISSSGLFCLSNIIYELLGSRSLLINKGMINLMPSMTIWWFLLSSSNMASPPSLNLLGEFSLLNSIISWSSYMILLLIFLSFFSAVYTLYMYSYS 402 HSP 2 Score: 55.4546 bits (132), Expect = 9.306e-19 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = -1 Query: 511 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 636 VK+PI FH WLP H EA S M+LAGILLK+G YG+ R+ Sbjct: 193 VKMPIFLFHLWLPKAHVEAPISGSMILAGILLKLGGYGIFRM 234
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_XENLA (NADH-ubiquinone oxidoreductase chain 4 OS=Xenopus laevis GN=mt-nd4 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.572e-18 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 VK+P+ H WLP H EA + M+LA ILLK+G YG+IRI++ L P + P F+I+ II +S Q +LK Sbjct: 205 VKMPLYGTHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRISITLSPSMKELAYP-FLILSLWGIIMTSSICLRQTDLK 283 HSP 2 Score: 51.9878 bits (123), Expect = 1.572e-18 Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFII-LGIGSITDTGLNGAVLQIISHGLISAALFFLAG-TSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG +I G L GA++ S GL +AL LA SY+R L GL +P + T + I ++A++ALP ++ E+ + + + I++T +G +LT YS Sbjct: 283 KSMIAYSSVSHMGLVISAGNNQTPMKALTGAMILNTSDGLTHSALCCLAKYQSYERTHSRALLLSRGLETILPLMGTWWLISNLANMALPPSPNWMGEITIMTALFNWSSW----TIILT---DLGTLLTASYS 409
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NQO13_THET8 (NADH-quinone oxidoreductase subunit 13 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo13 PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.492e-18 Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = -2 Query: 93 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFG 398 K +AY+ +SHMG LG+ S T G G + + + G+ + LF LAG Y+R + GLA P + L IL +A + LPG+SGF E + G Sbjct: 282 KTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRGLAQSAPGLAALALILFLAMVGLPGLSGFPGEFLTLLG 383 HSP 2 Score: 43.5134 bits (101), Expect = 4.492e-18 Identity = 21/80 (26.25%), Postives = 34/80 (42.50%), Query Frame = -1 Query: 397 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 636 +K P+ P H WLP H E H S G L K+G + R + L P + + + + +Y A + ++ K Sbjct: 203 IKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKDFK 282
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_APILI (NADH-ubiquinone oxidoreductase chain 4 OS=Apis mellifera ligustica GN=ND4 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.603e-18 Identity = 37/130 (28.46%), Postives = 67/130 (51.54%), Query Frame = -2 Query: 18 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKF---FLMPKIVITFVMAIGMIL 398 K IA SS+ HMG +I+ + + L G L +ISHGL S+ LFFL Y + + G+ +P + L+ +L +++ P ++E+++ G+I+ KF LM + +F+ +I + + Sbjct: 277 KSIIAISSIVHMGLMIMSMMTFLKISLIGGYLMMISHGLSSSGLFFLVNVIYSQTNSRLMFINKGMINFMPSMSLLWFMLCSSNMGSPVSLNLISEVMLLIGMISWLKFMMLILMMYCLFSFIYSIYLFM 406 HSP 2 Score: 49.6766 bits (117), Expect = 7.603e-18 Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = -1 Query: 511 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 636 VK+PI FH WL H EA Y M+LA I+LK+G YG++R+ Sbjct: 199 VKIPIYLFHGWLLKAHVEAPYYGSMILASIMLKLGGYGMLRL 240
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PORHY (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Porthidium hyoprora GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.005e-17 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A+P F EL +ITS F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVATIIIQTPWGLSGALALMIAHGFTSSALFCLANTTYERTHTRILILTRGLHNILPMATTWWLLANLMNIAIPPTMNFTGEL-----LITSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 1.005e-17 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQVLPTTKTDMFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PODAN (NADH-ubiquinone oxidoreductase chain 4 OS=Podospora anserina GN=ND4 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.281e-17 Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = -2 Query: 93 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLA-GTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFG 398 K+ IAYSSVSH ++G+ S G+ G +L + HG +S+ LF A G YDR + G A +P LF IL + + P FV E + +G Sbjct: 330 KELIAYSSVSHAAVYLIGVFSNIIQGIEGGILLGLGHGFVSSGLFICAGGVLYDRSGTRIISYYRGTAQVMPLFSILFFILCLGNCGAPLTLNFVGEFMSLYG 432 HSP 2 Score: 49.2914 bits (116), Expect = 1.281e-17 Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = -1 Query: 427 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAA 636 VK P + ++WL H E+ ++LAGI+LK+ YG+ R+ + LLP ++ +G + IIYA+ Sbjct: 251 VKTPTVFLNSWLLKAHVESPLGGSIVLAGIVLKLSLYGIFRLILPLLPKISLNYTSIIFSIGIITIIYAS 320
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIOK (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus okinavensis GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGLHNILPMATTWWLLTNLMNIATPPTMNFTSEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 35.039 bits (79), Expect = 1.307e-17 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + +F P FM++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDLFLP-FMVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIFL (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus flavoviridis GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.700e-17 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLTNLMNIATPPSLNFTSEL-----LIMSSLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 36.1946 bits (82), Expect = 1.700e-17 Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L P +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQVLPPTKTDMFLP-FIVLALWGAILANLTCLQQTDLK 60 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |