CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AGKHA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Agkistrodon halys blomhoffi GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.210e-17 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG ++ I T GL GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F +EL +ITS F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSVSHMGLVVAAIIIQTPWGLAGAMTLMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIAIPPSMNFTSEL-----LITSALFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 2.210e-17 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFVVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AGKPI (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Agkistrodon piscivorus piscivorus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.873e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGLHNILPMATTWWLLTNLMNIAIPPTMNFTGEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 2.873e-17 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOTER (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Bothrops erythromelas GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.736e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F EL +ITS F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVATIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLANLMNIAIPPTMNFTGEL-----LITSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 32.7278 bits (73), Expect = 3.736e-17 Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = -1 Query: 457 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 564 M+LA ILLK+G YG+IR+ L +F P+ ++ Sbjct: 6 MVLAAILLKLGGYGIIRMMQALPTTKTDMFLPFIVL 41
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AZEFE (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Azemiops feae GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.736e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAITIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRVLILTRGLHNILPMATTWWLLTNLMNIATPPTLNFTSEL-----LIMSSLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 32.7278 bits (73), Expect = 3.736e-17 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = -1 Query: 457 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 564 M+LA ILLK+G YG+IRI L +F P+ + Sbjct: 6 MVLAAILLKLGGYGIIRIMQTLPTTKTDLFIPFITL 41
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_SISMI (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Sistrurus miliarius GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.736e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGLHNMMPMATTWWLMANLMNIAIPPSMNFTGEL-----LILSTLFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 3.736e-17 Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M + P + +F P F+++ I A T Q +LK Sbjct: 6 MILAAILLKLGGYGIIRL-MQIFPTTKTDVFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AGKCO (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Agkistrodon contortrix contortrix GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.736e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L GL +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGLHNILPMATTWWLLTNLMNIAVPPTMNFTGEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 3.736e-17 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFVVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CAURH (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Causus rhombeatus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.857e-17 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T L+GA+ +I+HG S+ALF LA TSY+R L G +P T + + ++ ++A P M F +E +I S F P +I ++++ +++T IYS Sbjct: 60 KSLIAYSSISHMGLVVAAISIQTQWSLSGAMALMIAHGFTSSALFCLANTSYERTHTRILILTRGFHNILPMTTTWWLLSNLMNIATPPMMNFTSEF-----LILSSLFNWCPTTII--LLSLSILITSIYS 184 HSP 2 Score: 31.9574 bits (71), Expect = 4.857e-17 Identity = 22/56 (39.29%), Postives = 30/56 (53.57%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IRI L +F P F+ + + A T Q +LK Sbjct: 6 MVLAAILLKLGGYGMIRIIQILPSSKTDMFIP-FITLSLWGAVLANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_GLOIT (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Gloydius intermedius GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.857e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSVSHMGLVVAAIMIQTPWGLSGAMTLMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIAIPPTMNFTSEL-----LIMSALFSWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 32.3426 bits (72), Expect = 4.857e-17 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M ++P + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQIMPTTKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CROAD (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Crotalus adamanteus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.857e-17 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLVTNLMNIAIPPSMNFTGEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.4982 bits (75), Expect = 4.857e-17 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDLFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_RHISA (NADH-ubiquinone oxidoreductase chain 4 OS=Rhipicephalus sanguineus GN=ND4 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 6.207e-17 Identity = 34/122 (27.87%), Postives = 60/122 (49.18%), Query Frame = -2 Query: 33 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMA 398 K IAYSSVSHMG + G + G ++ +I HGL S+ LF L Y+R+ + + G+ I P + + + S+ +++ P EL + G++ +P +++ F+ A Sbjct: 260 KSLIAYSSVSHMGITLAGCVTFQLHTSFGMLMMMIGHGLCSSGLFCLKNMIYERLHTRSIMMIKGM-INFPNLSMWWFLFSIINMSAPMTMNLFGELFLGLGLMKYSLLLSLPVMMMIFLSA 380 HSP 2 Score: 51.6026 bits (122), Expect = 6.207e-17 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = -1 Query: 514 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR 636 VK+P+ FH WLP H EA + M+LAG+LLK+G YGL R Sbjct: 182 VKIPMFLFHLWLPKAHVEAPRAGSMILAGVLLKLGFYGLYR 222 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |