CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOTBI (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Bothriopsis bilineata GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.314e-17 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F EL +I+S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVATIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLANLMNIAIPPTMNFTGEL-----LISSSLFNWCPTTII--LLGLSMLITACYS 184 HSP 2 Score: 32.7278 bits (73), Expect = 6.314e-17 Identity = 21/56 (37.50%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L +F P F+++ + A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQVLPTTKTDMFLP-FIVLALWGAVLANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AGKAC (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Agkistrodon acutus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.314e-17 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + +++ ++A+P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLFVNLMNIAIPPTMNFTSEL-----LIMSTLFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 6.314e-17 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPATKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIWA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus wagleri GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.314e-17 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + ++++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSVSHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRVLILTRGFHNILPMATTWWLLINLMNIATPPTINFTSEL-----LIISALFNWCPTTMI--MLGLSMLITASYS 184 HSP 2 Score: 33.8834 bits (76), Expect = 6.314e-17 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDVFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_PORNA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Porthidium nasuta GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.314e-17 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIMIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTSTWWLLANLMNMATPPTLNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 34.2686 bits (77), Expect = 6.314e-17 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + +F P F+I+ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPMTKTDVFLP-FIILALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CROLE (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Crotalus lepidus GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.067e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA +Y+R L GL +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANMTYERTHTRILILTRGLHNTLPMATTWWLMTNLMNIAIPPSMNFTGEL-----LIMSSLFNWCPTTII--ILGLSMLITASYS 184 HSP 2 Score: 31.9574 bits (71), Expect = 1.067e-16 Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M + P + +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQIFPTTKTDLFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIST (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus stejnegeri GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.067e-16 Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSVSHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLANLMNIATPPTMNFTSEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 1.067e-16 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRICN (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus cantori GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.067e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIATPPTMNFTSEL-----LIMSTLFNWCPTTII--LLGMSMLITASYS 184 HSP 2 Score: 33.8834 bits (76), Expect = 1.067e-16 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IRI M ++P + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRI-MQIMPMTKTDMFLPFLVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOTAS (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Bothrops asper GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.387e-16 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG + I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F +EL +ITS F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVAAAIIIQTPWGLSGAMTLMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLANLMNIAIPPTLNFTSEL-----LITSTLFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 31.5722 bits (70), Expect = 1.387e-16 Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = -1 Query: 457 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 564 M+LA ILLK+G YG+IR+ L +F P ++ Sbjct: 6 MVLAAILLKLGGYGIIRMMQALPTTKTDMFLPLIVL 41
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_LACMU (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Lachesis muta muta GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.387e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVATIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLANLMNIAMPPTLNFTGEL-----LIMSTLFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 33.4982 bits (75), Expect = 1.387e-16 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQTLPTTKTDMFIP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOTSC (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Bothriechis schlegelii GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.387e-16 Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F E +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILIMTRGFHNILPMTTTWWLLANLMNIAIPPSMNFTGEF-----LIMSALFNWAPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.4982 bits (75), Expect = 1.387e-16 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGMIRM-MQILPTTKTDMFMPFIVLALWGAILANLTCLQQTDLK 60 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |