CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CERGO (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Cerrophidion godmani GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.803e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLANLMNIATPPTLNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 1.803e-16 Identity = 21/56 (37.50%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA +LLK+G YG+IR+ L +F P F+++ I A T Q +LK Sbjct: 6 MVLAAVLLKLGGYGIIRMMQTLPTTKTDMFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIRU (NADH-ubiquinone oxidoreductase chain 4 OS=Trichophyton rubrum GN=ND4 PE=3 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 2.297e-16 Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = -2 Query: 90 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFF-LAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGI 398 K+ IAYSSVSH +L S T G+ GA+ ++HG +S+ LF + G YDR + G+A +P LF +++ + P F+ E + +GI Sbjct: 306 KELIAYSSVSHAAVYLLSAFSNTIQGIEGAIALGLAHGFVSSGLFICVGGILYDRSSTRLITYYRGMAQLMPIFCILFLYITLGNCGSPLTLNFIGEFMSLYGI 409 HSP 2 Score: 47.7506 bits (112), Expect = 2.297e-16 Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = -1 Query: 427 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAA 636 VK P I +TWL H E+ + ++LAGI+ K+ YG+ R+ + LLP A ++ ++G + I Y + Sbjct: 227 VKTPTIFLNTWLLKAHVESPLAGSVILAGIVWKLRWYGIFRLIIPLLPKASMDYTYIVYVIGVITIFYTS 296
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CROVC (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Crotalus viridis concolor GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.344e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A+P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLMTNLMNIAIPPSMNFTGEL-----LIMSALFNWCPATII--MLGLSMLITASYS 184 HSP 2 Score: 31.9574 bits (71), Expect = 2.344e-16 Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M + P + +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQIFPTTKTDLFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ATRPI (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Atropoides picadoi GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.344e-16 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLTGAMTLMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLANLMNIATPPTLNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 2.344e-16 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIAB (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus albolabris GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.047e-16 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIATPPTMNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 31.9574 bits (71), Expect = 3.047e-16 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M ++P + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQIMPTTKTDTFLPFLVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: Y051_MYCTU (Uncharacterized protein Rv0083/MT0090 OS=Mycobacterium tuberculosis GN=Rv0083 PE=3 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 3.857e-16 Identity = 40/137 (29.20%), Postives = 69/137 (50.36%), Query Frame = -2 Query: 21 KKRIAYSSVSHMGFIILGIGSIT---DTGLNG--------AVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMI 398 K+ +AYS+ +MG I L +G+ T DTG G A+L +I+H + F AG+ LD +GGLA +P F + ++ + LP +GFV+E ++ +I + P + +T +A+G++ Sbjct: 268 KRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAATGLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGH-DPIVALTTPLAVGVV 403 HSP 2 Score: 44.669 bits (104), Expect = 3.857e-16 Identity = 21/80 (26.25%), Postives = 38/80 (47.50%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K ++P H WLP H EA L++ ++ +G YG++R ++ LL + + VG +Y + +LK+ Sbjct: 190 KAGLVPLHAWLPRAHPEAPSPVSALMSAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKR 269
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_POROP (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Porthidium ophryomegas GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.961e-16 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSSVSHMG + I T GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSVSHMGLVAAAIIIQTPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTSTWWLLANLMNIATPPSLNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 3.961e-16 Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDMFLPFIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_BOTLA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Bothriechis lateralis GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.961e-16 Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T GL+GA+ +++HG S++LF LA T+Y+R L G +P T + + ++ ++A P F EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWGLSGAMALMVAHGFTSSSLFCLANTTYERTHTRILILTRGFHNILPMATTWWLLANLLNIATPPSMNFTGEL-----LIMSALFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.4982 bits (75), Expect = 3.961e-16 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQVLPTTKTEMFLP-FLVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ATRNM (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Atropoides nummifer GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.961e-16 Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I + GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQSPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLANLMNIATPPTLNFTSEL-----LIMSTLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.4982 bits (75), Expect = 3.961e-16 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHS-IFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ M +LP + +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRM-MQILPTTKTDLFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CAEEL (NADH-ubiquinone oxidoreductase chain 4 OS=Caenorhabditis elegans GN=nd4 PE=3 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 6.583e-16 Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = -2 Query: 33 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAE-LIVFFGIITSQKFFLMPKIVITFVMA 398 K AYSSV+HM F++L + IT + +V+ +++HG S +F+L G Y + M + LFS++ +++ +P F++E L++ ++ S+ F+M I I FV++ Sbjct: 244 KALAAYSSVTHMSFLLLSLVFITMSSKISSVMLMLAHGYTSTLMFYLIGEFYHTSGSRMIYFMSSFFSSSMIMGILFSVVFLSNSGVPPSLSFLSEFLVISNSMLISKSMFVM--IFIYFVVS 364 HSP 2 Score: 50.447 bits (119), Expect = 6.583e-16 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = -1 Query: 457 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 636 +K PI H WLP H EA + MLLAG+LLK+G G +RI +G L H+ + W +I Sbjct: 169 MKFPIYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI-LGSLSFVHN--NVWILI 225 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |