CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_TRIEL (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Trimeresurus elegans GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.692e-16 Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ I T L+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAIIIQTPWSLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMTTTWWLLTNLMNIATPPTLNFTSEL-----LIMSSLFNWCPTTII--LLGLSMLITASYS 184 HSP 2 Score: 33.113 bits (74), Expect = 6.692e-16 Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = -1 Query: 397 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLK 564 M+LA ILLK+G YG+IR+ L +F P F+++ I A T Q +LK Sbjct: 6 MVLAAILLKLGGYGIIRMMQVLPTTKTDMFLP-FIVLALWGAILANLTCLQQTDLK 60
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ASCSU (NADH-ubiquinone oxidoreductase chain 4 OS=Ascaris suum GN=ND4 PE=3 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 8.556e-16 Identity = 31/113 (27.43%), Postives = 59/113 (52.21%), Query Frame = -2 Query: 72 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSY----DRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKF 398 K AYSS++HM F+++ + I +G G V+ +++HG S +F+L G Y R+ + Y+ G + + LF+++ ++++ P F++E IV + KF Sbjct: 244 KALAAYSSITHMSFVLMALVFIIMSGKTGGVILMLAHGYTSTLMFYLVGEFYHVSGSRMVY-YMSSFFGSGMIMA---LLFAVVFLSNMGTPPSLSFLSEFIVISSSLNMMKF 352 HSP 2 Score: 49.2914 bits (116), Expect = 8.556e-16 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = -1 Query: 481 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHS 636 +K P+ H WLP H EA + MLLAG+LLK+G G +RI +G L H+ Sbjct: 169 MKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI-LGCLSFVHN 219
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_ARTSF (NADH-ubiquinone oxidoreductase chain 4 OS=Artemia sanfranciscana GN=ND4 PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.114e-15 Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = -2 Query: 93 KKRIAYSSVSHMGFIILG-IGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFG 398 K IAYSSV+HM F+ILG + S T T ++ ++L ++SHG+ S+ LF+L+ Y RI + P + + LS ++ LP F +E+ F G Sbjct: 217 KSLIAYSSVAHMSFVILGMLMSCTYTNMS-SILMMVSHGICSSGLFYLSYLFYARIWSRSFLLTRSMISLFPYLCFWWLSLSFLNMGLPPSLNFFSEMYFFIG 318 HSP 2 Score: 46.9802 bits (110), Expect = 1.114e-15 Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = -1 Query: 505 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 636 VKLP+ H WLP H EA + M+LA ILLK+G YGL + + Sbjct: 143 VKLPVYFAHIWLPKAHVEAPVTGSMVLAAILLKLGGYGLYLVQV 186
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_HYPHY (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Hypnale hypnale GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.130e-15 Identity = 44/132 (33.33%), Postives = 71/132 (53.79%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG ++ + + GL+GA+ +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVVAAVIIQSPWGLSGAMALMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIATPPTMNFTSEL-----LIVSTLFNWCPTTII--MLGLSMLITTTYS 184 HSP 2 Score: 31.187 bits (69), Expect = 1.130e-15 Identity = 15/36 (41.67%), Postives = 23/36 (63.89%), Query Frame = -1 Query: 457 MLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMI 564 M+LA ILLK+G YG+IR+ L +F P+ ++ Sbjct: 6 MVLAAILLKLGGYGIIRMVQILPTTKTDLFIPFIVL 41
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_DESAP (NADH-quinone oxidoreductase subunit N OS=Desulforudis audaxviator (strain MP104C) GN=nuoN PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.438e-15 Identity = 35/130 (26.92%), Postives = 65/130 (50.00%), Query Frame = -2 Query: 6 KRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 395 + +AYSSV+ +G+I+LG+ L GA+L ++SH L+ LFF+AG + + G+A +P F +++ + LP GF ++ + G + + + V V+ + +LT +Y Sbjct: 304 RMLAYSSVAQVGYIVLGLAVGNVLALYGALLHVLSHALVKGGLFFIAGGVSWETGVRRVSDFVGIAKKMPLTMGAFVAAALSMIGLPPTLGFFSKWYLVLGCLEAGAW------VFVAVLVVSSLLTAVY 427 HSP 2 Score: 40.0466 bits (92), Expect = 1.438e-15 Identity = 22/82 (26.83%), Postives = 39/82 (47.56%), Query Frame = -1 Query: 400 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVG---TVQIIYAASTSPGQRNL 636 +K+ + P H WLPD + +A ++ K+ AY L RI + + A SP ++G I++ + + QR+L Sbjct: 222 IKMALFPLHGWLPDAYSYTPAPVLAFMAAVMTKVSAYALYRI-LYFVTEAAGPVSPTLQVLGWMAAAGILFGSIMAIAQRDL 302
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_AGKRH (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Agkistrodon rhodostoma GN=MT-ND4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.447e-15 Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 3 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYS 398 K IAYSS+SHMG + I T GL+G + +I+HG S+ALF LA T+Y+R L G +P T + + ++ ++A P + F +EL +I S F P +I ++ + M++T YS Sbjct: 60 KSLIAYSSISHMGLVAAAIIIQTPWGLSGGMTLMIAHGFTSSALFCLANTTYERTHTRILILTRGFHNILPMATTWWLLTNLMNIATPPTTNFTSEL-----LIMSALFNWCPTTII--MLGLSMLITASYS 184 HSP 2 Score: 30.0314 bits (66), Expect = 5.447e-15 Identity = 14/24 (58.33%), Postives = 20/24 (83.33%), Query Frame = -1 Query: 493 MLLAGILLKMGAYGLIRINMGLLP 564 M+LA ILLK+G YG+IR+ M ++P Sbjct: 6 MVLAAILLKLGGYGIIRM-MQIMP 28
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: HYFB_ECOLI (Hydrogenase-4 component B OS=Escherichia coli (strain K12) GN=hyfB PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 1.508e-14 Identity = 32/107 (29.91%), Postives = 56/107 (52.34%), Query Frame = -2 Query: 111 KKRIAYSSVSHMGFIILGIGS-----------ITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAE 398 K+ +A+S+V ++G I+L +G +T GL GA+ +++H L LF AG R+ +++MG LA +P I +A A+P ++GF++E Sbjct: 301 KRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISE 407 HSP 2 Score: 44.669 bits (104), Expect = 1.508e-14 Identity = 21/84 (25.00%), Postives = 46/84 (54.76%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWF----MIVGTVQIIYAASTSPGQRNLKK 633 K ++P H+WLP H A L++G+++K+G +G++++ M LL A + W+ M +G + + + ++++K+ Sbjct: 221 KAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLL--AQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKR 302
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUOM_MYCTU (NADH-quinone oxidoreductase subunit M OS=Mycobacterium tuberculosis GN=nuoM PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.129e-14 Identity = 43/128 (33.59%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 6 IAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 389 IAY+S+SH GFII GI +T G +G+ L +++HGL +AA+F +AG R + + GG+ P + F + +MA+++LPG++ F++E +V G T +++L +T ++L+ +Y Sbjct: 343 IAYTSISHFGFIIAGIFVMTTQGQSGSTLYMLNHGLSTAAVFLIAGFLIARRGSRSIADYGGVQKVAPILAGTFMVSAMATVSLPGLAPFISEFLVLLG--TFSRYWLAAAFGVT-----ALVLSAVY 463
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_MOOTA (NADH-quinone oxidoreductase subunit N OS=Moorella thermoacetica (strain ATCC 39073) GN=nuoN PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 3.512e-13 Identity = 34/113 (30.09%), Postives = 59/113 (52.21%), Query Frame = -2 Query: 66 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLA--IPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFL 398 K+ +AYSS++ G+++LGI S + G+ + + + + F A Y+ + + GLA P+ LFS+LS+A +P M+GFV + +F II+ Q +L Sbjct: 291 KRLLAYSSIAQAGYLLLGIVSFSVLGVGAVMYYAMLYVFGNMGAFMAATAFYNNDGSDEIKDYAGLARRSPLVAALMLFSLLSLA--GIPPMAGFVGKFYLFMSIISRQYIWL 401 HSP 2 Score: 40.0466 bits (92), Expect = 3.512e-13 Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + A L+ + K A+ L+R+ G LP HS + F+ + + I+ + Q N+K+ Sbjct: 213 KVTAVPFHMWSPDVYEGAPTPVTGFLS-VASKAAAFAALVRVFFGALPDLHSFWVQLFIALAVLTIVLGNLVAIPQTNIKR 292
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: HYCC_ECOLI (Formate hydrogenlyase subunit 3 OS=Escherichia coli (strain K12) GN=hycC PE=3 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 1.289e-12 Identity = 36/142 (25.35%), Postives = 73/142 (51.41%), Query Frame = -2 Query: 15 KKRIAYSSVSHMGFIILGIGS-----------ITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIV---FFGIITSQKFFLMPKIVITFVMAIGMILT 398 ++ +AY ++ ++G I+LG+G+ + GL G + +++H L + LF AG+ + R ++++GG+ +P I + MA ALP ++GF E ++ FF + S F ++ ++A+G+ +T Sbjct: 285 QRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVAR---LLGPLLAVGLAIT 423 HSP 2 Score: 35.4242 bits (80), Expect = 1.289e-12 Identity = 12/40 (30.00%), Postives = 23/40 (57.50%), Query Frame = -1 Query: 505 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 624 IIP H W+P H A L + +++K+G G++ +++ Sbjct: 211 IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL 250 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |