CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: MNHD2_STAES (Putative antiporter subunit mnhD2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mnhD2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.296e-12 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 30 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAI 398 KK AY + +GFIILG+GS T +G+NGA+ + + ++ LFF+ G+ + + GLA P F ++ A +P SGF ++++F G IT+ + + +++T ++A+ Sbjct: 297 KKIAAYQVILSIGFIILGLGSHTISGVNGAIFYLANDIIVKTLLFFVIGSLVYMSGYRNYQYLSGLAKREPFFGVAFVVVIFAIGGVPPFSGFPGKVLIFQGAITNGNYIGLALMIVTSLIAM 419 HSP 2 Score: 24.6386 bits (52), Expect = 1.296e-12 Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = -1 Query: 517 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLI 624 +I F T L D H ++ + +A I + +GA+G+I Sbjct: 256 LIRFFTLLFDHHPSVTHTLLVFMACITMIIGAFGVI 291
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: MNHD2_STAEQ (Putative antiporter subunit mnhD2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mnhD2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.296e-12 Identity = 37/123 (30.08%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 30 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAI 398 KK AY + +GFIILG+GS T +G+NGA+ + + ++ LFF+ G+ + + GLA P F ++ A +P SGF ++++F G IT+ + + +++T ++A+ Sbjct: 296 KKIAAYQVILSIGFIILGLGSHTISGVNGAIFYLANDIIVKTLLFFVIGSLVYMSGYRNYQYLSGLAKREPFFGVAFVVVIFAIGGVPPFSGFPGKVLIFQGAITNGNYIGLALMIVTSLIAM 418 HSP 2 Score: 24.6386 bits (52), Expect = 1.296e-12 Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = -1 Query: 517 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLI 624 +I F T L D H ++ + +A I + +GA+G+I Sbjct: 255 LIRFFTLLFDHHPSVTHTLLVFMACITMIIGAFGVI 290
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_SACEN (NADH-quinone oxidoreductase subunit N OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=nuoN PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.835e-12 Identity = 39/123 (31.71%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 39 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF---FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFV 398 K+ IAYSSV+H GF+++G ++T+ GL G + ++++G + A+F L TS +L + GLA P + +F+ L +A +P SGFV + +VF + + P +V+ V Sbjct: 331 KRMIAYSSVAHAGFLLVGSIALTERGLAGTMFYLLAYGFTTIAIFGVISLVRTSDGEA--THLSDWAGLAKRSPVVAWVFTFLLLALAGIPMTSGFVGKFVVFEAALADG---MAPLVVVALV 448 HSP 2 Score: 26.9498 bits (58), Expect = 2.835e-12 Identity = 12/41 (29.27%), Postives = 19/41 (46.34%), Query Frame = -1 Query: 511 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRI 633 K + PFHTW PD + A + +A G++R+ Sbjct: 253 KASVGPFHTWTPDVYQGAPTAVTGFMAACTKVAAFGGILRV 293
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: MRPD_BACSU (Na(+)/H(+) antiporter subunit D OS=Bacillus subtilis GN=mrpD PE=1 SV=3) HSP 1 Score: 60.8474 bits (146), Expect = 3.685e-12 Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = -2 Query: 18 KRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMIL 395 K + Y+ ++ +G I+ G+ T + GA+ +I LI ALF LAGT A L +MGGL P + +F I +++ +P +SGFV + + G +F + I+++ ++ + +L Sbjct: 298 KIVIYNIITAVGVILFGVAVHTPASIQGAIYYLIHDMLIKGALFMLAGTLIALTGTASLHKMGGLIKRYPVLGWMFFISAISLAGIPPLSGFVGKFKIAEGGFAEGEFTISMLILLSSLLVLYSVL 423 HSP 2 Score: 29.6462 bits (65), Expect = 3.685e-12 Identity = 16/77 (20.78%), Postives = 32/77 (41.56%), Query Frame = -1 Query: 394 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 624 I P + WLP ++ + L +L K+G Y + R+ + H + + + + +I+ S N+ K Sbjct: 222 IFPLYFWLPGSYYAPPAAISALFGALLTKVGLYAITRVFTLIFIHDTAFTHQLMIWLAALTVIFGVIGSLAYSNVMK 298
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_CHLCH (NADH-quinone oxidoreductase subunit N OS=Chlorobium chlorochromatii (strain CaD3) GN=nuoN PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 6.206e-12 Identity = 29/111 (26.13%), Postives = 57/111 (51.35%), Query Frame = -2 Query: 66 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFL 398 K+ +AYSS++H G+ +LG+ + G + ++S+ L++ FF+ +R LD+ GL +P ++ ++ + LP GF+ +L+VF +I F+ Sbjct: 321 KRLLAYSSIAHAGYALLGVIVMDKLGTQATLFYLLSYLLMNFGAFFVVVLIANRTGSESLDDYRGLGKSMPLAGAALTVFLISLVGLPPTIGFIGKLMVFSALIAKGSIFM 431 HSP 2 Score: 33.113 bits (74), Expect = 6.206e-12 Identity = 22/88 (25.00%), Postives = 39/88 (44.32%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFS-----PWF---MIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + + L+ G L+R LPH +++ + WF +I+ +IY + Q+N+K+ Sbjct: 235 KIGAVPFHFWAPDVYEGSPTPVTAYLSVASKAAGFALLMRFVYVALPHTNNVQAATLGIDWFTLLVILAVASMIYGNVVALWQKNVKR 322
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON2_SOLUE (NADH-quinone oxidoreductase subunit N 2 OS=Solibacter usitatus (strain Ellin6076) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 8.065e-12 Identity = 33/126 (26.19%), Postives = 63/126 (50.00%), Query Frame = -2 Query: 24 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFF-LAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGM 398 K+ +AYSS+SH G+++LG+ + DTG+ G + ++ + ++ F + I LD++ GL P L I ++ +P +GF+ + +F +I + L IV T +A+ + Sbjct: 311 KRLLAYSSISHAGYMLLGLVAGNDTGIKGIAVYVMVYTFMNLGAFLVIIAMRRASIIGEDLDDLAGLVHKSPGYAFLMLIFLLSLAGIPPTAGFLGKYYIFLALIQTGHTGL--AIVATLYVAVAI 434 HSP 2 Score: 36.965 bits (84), Expect = 8.065e-12 Identity = 19/80 (23.75%), Postives = 35/80 (43.75%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + A + L+ L+RI +G L A +++ P + + + + Q N+K+ Sbjct: 233 KVSAVPFHMWAPDAYEGAPTTVTAYLSVASKAASIAFLLRIFLGPLASARAVWEPLLAFIAIITLTIGNLAAINQTNIKR 312
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4M_CHLRE (NADH-ubiquinone oxidoreductase chain 4 OS=Chlamydomonas reinhardtii GN=ND4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12 Identity = 40/131 (30.53%), Postives = 66/131 (50.38%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KK +AYSS++HM + L I S ++ + +I+HGLIS ALF + G YDR ++ GL +P TLF + ++ +LA P F+AE++ I + ++ +V + +L Y Sbjct: 277 KKIVAYSSIAHMSMVTLAIFSQSEFSAYSSSFLMIAHGLISPALFLIVGILYDRAHTKFILYFSGLGASMPIGSTLFFLFTLGNLAFPLFPNFIAEVLCMVSIFAVHE-------LLAYVFCVCQVLGAAY 400
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_RUTMC (NADH-quinone oxidoreductase subunit N OS=Ruthia magnifica subsp. Calyptogena magnifica GN=nuoN PE=3 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 1.360e-11 Identity = 30/122 (24.59%), Postives = 59/122 (48.36%), Query Frame = -2 Query: 36 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF-FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVM 398 K+ +AYS++SH+GFI+LG + T G A ++ + L+S A F + + + + GL P + I+ ++ +P + GF ++ + ++ S F + IV+ F + Sbjct: 305 KRMLAYSTISHVGFIMLGFVAGTPIGYGAAAFYMLVYVLMSLAAFGMIILLNKQGFEIDQISDFKGLNKHAPWFALMMLIIILSMAGVPPLVGFYSKFFILQQVV-SAGFITIAVIVVIFAV 425 HSP 2 Score: 41.9726 bits (97), Expect = 1.360e-11 Identity = 24/81 (29.63%), Postives = 44/81 (54.32%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 KL +PFH W+PD + A S + ++ + K+ A+ L+RI + L H+ +S FM++ + I + + Q N+K+ Sbjct: 227 KLGAVPFHMWVPDVYQGAPTSVTLFISTV-PKIAAFAMLVRILVDGLDSMHAYWSDLFMVLSILSIALGSVVALMQSNIKR 306
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON_AZOC5 (NADH-quinone oxidoreductase subunit N OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=nuoN PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.361e-11 Identity = 29/105 (27.62%), Postives = 56/105 (53.33%), Query Frame = -2 Query: 87 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF-FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGII 398 K+ +AYSS+ HMGF ++G+ + T+ G+ G +L + + +++ F + D ++++ GLA P + + L + +P ++GFVA+ VF I Sbjct: 294 KRLLAYSSIGHMGFALVGLAAGTEQGVTGVLLYMAIYVVMTLGSFTCVLAMRRDGRSVETIEDLAGLARTKPLMALALAALMFSLAGIPPLAGFVAKYYVFLAAI 398 HSP 2 Score: 35.8094 bits (81), Expect = 1.361e-11 Identity = 20/80 (25.00%), Postives = 31/80 (38.75%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + A A +R+ + LPH + V + A + GQRN+K+ Sbjct: 216 KVSAVPFHMWTPDVYEGAPTPVTAFFATAPKVAAMAVFVRVAVEALPHVTHSWQQIVTFVSIASMALGAFAAIGQRNIKR 295
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NUON1_RHIME (NADH-quinone oxidoreductase subunit N 1 OS=Rhizobium meliloti GN=nuoN1 PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.293e-11 Identity = 31/113 (27.43%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 66 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF--FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFL 398 K+ +AYSS+ HMG+ ++G+ + + G+ G +L ++ + +++ F LA + +D++ GL+ P + T+ +IL + +P ++GF A+ VF I +Q + L Sbjct: 297 KRLMAYSSIGHMGYALVGLAAGSMAGVRGVILYMLIYMVMTLGTFACILAMRRREGEHVEGIDDLAGLSQTNPFMATVLTILMFSLAGIPPLAGFFAKYFVFVAAIEAQLYGL 409 HSP 2 Score: 30.8018 bits (68), Expect = 2.293e-11 Identity = 21/82 (25.61%), Postives = 37/82 (45.12%), Query Frame = -1 Query: 394 KLPIIPFHTWLPDTH-GEAHYSTCMLLAGILLKMGAYG-LIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKK 633 K+ +PFH W PD + G T AG K+ A L+RI + + + + + ++ + + GQRN+K+ Sbjct: 219 KISAVPFHMWTPDVYEGAPTPVTAFFAAG--PKVAAISILVRIVINAFEPVVADWQQIIVFISIASMLLGSFAAIGQRNIKR 298 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |