CK933901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_SACHY (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Saccharum hybrid GN=ndhD PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 3.016e-103 Identity = 104/131 (79.39%), Postives = 120/131 (91.60%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFMLMPKMLITFVMAIGMILTPIY 432 HSP 2 Score: 182.185 bits (461), Expect = 3.016e-103 Identity = 93/141 (65.96%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEP L+LE L+N+SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR+NM LLPHAH +FSPW +I+G VQIIYAA TS GQRN KK+ Sbjct: 164 ATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPTTLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRVNMELLPHAHYLFSPWLVIIGAVQIIYAALTSLGQRNFKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_HORVU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Hordeum vulgare GN=ndhD PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 5.133e-103 Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK +ITFVMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKALITFVMAIGMILTPIY 432 HSP 2 Score: 182.185 bits (461), Expect = 5.133e-103 Identity = 93/141 (65.96%), Postives = 101/141 (71.63%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEP L+LE L+N+SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM LLPHAH +FSPW +I+G +QIIYAA TS GQRN KK+ Sbjct: 164 ATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAALTSLGQRNFKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_POPAL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Populus alba GN=ndhD PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.940e-102 Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGF I+GI SI+D GLNGA+LQIISHG I AALFFL+GTSYDRIR YLDEMGG+A +PKIF +FSILS+ASLALPGMSGF AEL+VFFGIIT++KFFLMPKI+ITFV A+G ILTPIY Sbjct: 302 KKRIAYSSVSHMGFTIIGIYSISDMGLNGAILQIISHGFIGAALFFLSGTSYDRIRLVYLDEMGGMATLMPKIFMMFSILSLASLALPGMSGFFAELVVFFGIITAKKFFLMPKILITFVTAVGTILTPIY 432 HSP 2 Score: 182.185 bits (461), Expect = 1.940e-102 Identity = 94/141 (66.67%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPT N ET N+SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LL HAHSIFS W +IVG +QIIYAASTS GQ+NLKK+ Sbjct: 164 ATKFILYTAGSSVFLLMGALGIAFYASNEPTFNFETSANQSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSIFSSWLIIVGAIQIIYAASTSSGQKNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_MAIZE (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Zea mays GN=ndhD PE=3 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 3.303e-102 Identity = 104/131 (79.39%), Postives = 120/131 (91.60%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFMLMPKMLITFVMAIGMILTPIY 432 HSP 2 Score: 178.718 bits (452), Expect = 3.303e-102 Identity = 92/141 (65.25%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEP L+LE L+N+SYP E AVKLPIIP HTWLP THGEAHYSTCMLLAGILLKMGAYGLIR+NM LLPHAH +FSPW +I+G VQIIYAASTS GQRN KK+ Sbjct: 164 ATKFILYTAGGSIFFLIGVLGMGLYGSNEPGLDLERLINQSYPTTWEILLYFGFLIAYAVKLPIIPLHTWLPYTHGEAHYSTCMLLAGILLKMGAYGLIRVNMELLPHAHYLFSPWLVIIGAVQIIYAASTSLGQRNFKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_POPTR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Populus trichocarpa GN=ndhD PE=3 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 4.309e-102 Identity = 104/131 (79.39%), Postives = 118/131 (90.08%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSSVSHMGF I+GI SI+D GLNGA+LQIISHG I AALFFL+GTSYDRIR YLDEMGG+A +PKIF +FSILS+ASLALPGMSGF AEL+VFFGIIT++K+FLMPKI+ITFV A+G ILTPIY Sbjct: 302 KKRIAYSSVSHMGFTIIGICSISDMGLNGAILQIISHGFIGAALFFLSGTSYDRIRLVYLDEMGGMATLMPKIFMMFSILSLASLALPGMSGFFAELVVFFGIITAKKYFLMPKILITFVTAVGTILTPIY 432 HSP 2 Score: 182.185 bits (461), Expect = 4.309e-102 Identity = 94/141 (66.67%), Postives = 100/141 (70.92%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA SNEPT N ET N+SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINM LL HAHSIFS W +IVG +QIIYAASTS GQ+NLKK+ Sbjct: 164 ATKFILYTAGSSVFLLMGALGIAFYASNEPTFNFETSANQSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSIFSSWLIIVGAIQIIYAASTSSGQKNLKKR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_LOLPR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lolium perenne GN=ndhD PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.617e-101 Identity = 103/131 (78.63%), Postives = 120/131 (91.60%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 KKRIAYSS+SHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY Sbjct: 304 KKRIAYSSISHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKMLITFVMAIGMILTPIY 434 HSP 2 Score: 175.637 bits (444), Expect = 3.617e-101 Identity = 92/143 (64.34%), Postives = 100/143 (69.93%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXS--NEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA NE L+LE L+N+SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM LLPHAH +FSPW +I+G +QIIYAASTS GQRN KK+ Sbjct: 164 ATKFILYTAGGSIFFLIGVLGMGLYGYGSNELGLDLERLINQSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKR 306
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_CRYJA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cryptomeria japonica GN=ndhD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.363e-96 Identity = 97/131 (74.05%), Postives = 115/131 (87.79%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+I+GIGS+T TGLNGA+LQ+ISHGLI AALFFL GTSYDRIR +LDEMGG+AIPIPKIFT+FS SMASLALPGMSGFVAE ++F G+IT+ K+ +I+IT + AIGMILTPIY Sbjct: 302 KRRIAYSSISHMGFVIIGIGSMTYTGLNGAILQMISHGLIGAALFFLVGTSYDRIRTLFLDEMGGIAIPIPKIFTMFSSFSMASLALPGMSGFVAEFMIFLGVITNHKYSSTFRIIITAIAAIGMILTPIY 432 HSP 2 Score: 172.555 bits (436), Expect = 4.363e-96 Identity = 85/141 (60.28%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKF+LYTA S+ PT + E L + YP+ LE A+KLPI P HTWLPDTHGEAHYSTCMLLAG+LLKMG YGLIRINM LLPHAHS+FSPW +I+G VQIIYAA TS GQRNLK++ Sbjct: 164 ATKFLLYTAGGSIFILMGALSMGLYGSHGPTFDFELLAKKDYPITLEILLYLGFLIAYAIKLPIFPLHTWLPDTHGEAHYSTCMLLAGVLLKMGGYGLIRINMELLPHAHSLFSPWLIIIGAVQIIYAALTSMGQRNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_ANGEV (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Angiopteris evecta GN=ndhD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.975e-93 Identity = 94/131 (71.76%), Postives = 115/131 (87.79%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+++GIGS+T+ GLNGA+LQ+ISHGL AALFFLAGTSYDR R +LD++GG+AI +PK+FT+FSI S+ASLALPGMSGFVAEL+VF GI+ SQ + L KIVIT + AIG+ILTPIY Sbjct: 302 KRRIAYSSVSHMGFVMIGIGSLTNIGLNGAILQMISHGLTGAALFFLAGTSYDRTRTLFLDQLGGIAISMPKLFTMFSIFSLASLALPGMSGFVAELMVFLGIVISQNYSLTFKIVITIIEAIGIILTPIY 432 HSP 2 Score: 169.859 bits (429), Expect = 1.975e-93 Identity = 84/141 (59.57%), Postives = 98/141 (69.50%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA +N P ++++L RSYP+ALE AVKLPI PFHTWLPDTHGEAHYSTCMLLAGILLKMG YGLIRINM LLPHAH+IF+PW ++ G VQI+YA+ S QRNLK++ Sbjct: 164 ATKFILYTAGGSIFLLIGALTIGLYGNNGPLFDIQSLATRSYPIALEIIIYSGFLIAYAVKLPIFPFHTWLPDTHGEAHYSTCMLLAGILLKMGGYGLIRINMELLPHAHAIFAPWMVMFGAVQIVYASLISLNQRNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_CYCTA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cycas taitungensis GN=ndhD PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.678e-92 Identity = 95/131 (72.52%), Postives = 112/131 (85.50%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSSVSHMGF+I+GIGS+ DT LNGA+LQ+ISHGLI AALFFLAGTSYD IR +LD +GG+AIP+ KI T+FS SMASLALPGMSGFVAE +V GIITS+K+ L +IVI +MAIGMILTPI+ Sbjct: 302 KRRIAYSSVSHMGFVIVGIGSMADTSLNGAILQMISHGLIGAALFFLAGTSYDGIRTLFLDGIGGMAIPMSKISTMFSSFSMASLALPGMSGFVAESMVLLGIITSRKYSLTFQIVIAAIMAIGMILTPIH 432 HSP 2 Score: 172.94 bits (437), Expect = 3.678e-92 Identity = 88/141 (62.41%), Postives = 97/141 (68.79%), Query Frame = -1 Query: 391 ATKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 813 ATKFILYTA + PTL+ E L N+ YPV LE A+KLPI+P HTWLPDTHGEAHYSTCMLLAGI LKMG YGLIRINM LLPHAHS+FSPW +IVG VQIIYAA TS QRNLK++ Sbjct: 164 ATKFILYTAGGSIFISMGASSMGLYGFDGPTLDFEILANKYYPVVLEIVFYLGFFIAHAIKLPILPLHTWLPDTHGEAHYSTCMLLAGIPLKMGGYGLIRINMELLPHAHSLFSPWLVIVGAVQIIYAALTSLSQRNLKRR 304
BLAST of CK933901 vs. ExPASy Swiss-Prot
Match: NU4C_PHYPA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Physcomitrella patens GN=ndhD PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.848e-91 Identity = 90/131 (68.70%), Postives = 111/131 (84.73%), Query Frame = -2 Query: 6 KKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIY 398 K+RIAYSS+SHMGF+++GIGS+TD GLNGA+LQ++SHGLI AALFFLAG +YDR R +LD+MGG AI +PKIFT+FS SMASLALPGMSGFVAE +VF GI+ S K+ KI++T + AIG+ILTPIY Sbjct: 302 KRRIAYSSISHMGFVLIGIGSMTDVGLNGAILQMVSHGLIGAALFFLAGITYDRTRTLFLDQMGGTAIYMPKIFTMFSSFSMASLALPGMSGFVAEFLVFLGIVVSNKYSFNFKILVTIIEAIGIILTPIY 432 HSP 2 Score: 166.777 bits (421), Expect = 6.848e-91 Identity = 85/140 (60.71%), Postives = 96/140 (68.57%), Query Frame = -1 Query: 391 TKFILYTAXXXXXXXXXXXXXXXXXSNEPTLNLETLVNRSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMGLLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKK 810 TKFILYTA SN+ TL+ + L N+SYP+ LE AVKLPI P HTWLPDTHGEAHYSTCMLLAGILLKMG YGLIRINM LLPHAHSIF+PW + VG +QI+YAA S QRNLK++ Sbjct: 165 TKFILYTAGGSIFILMGALTMGFYGSNQLTLDFQNLSNKSYPLELEIILYLGFFIAYAVKLPIFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYGLIRINMELLPHAHSIFAPWIVAVGAIQIVYAALISFSQRNLKRR 304 The following BLAST results are available for this feature:
BLAST of CK933901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933901 ID=CK933901; Name=CK933901; organism=Citrus sinensis; type=EST; length=813bpback to top |