CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            +  +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G F   + A   M     G+II+ +SV G +G      Y ++K G++GL K+ A EL   GI VN V+P  + + +      L+D+    M + +  A   +  DIA    +L SD++K ++G  + V+GG
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            +  +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G F   + A   M     G+II+ +SV G +G      Y ++K G++GL K+ A EL   GI VN V+P  + + +      L+D+    M + +  A   +  DIA    +L SD++K ++G  + V+GG
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            +  +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G F   + A   M     G+II+ +SV G +G      Y ++K G++GL K+ A EL   GI VN V+P  + + +      L+D+    M + +  A   +  DIA    +L SD++K ++G  + V+GG
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            +  +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G F   + A   M     G+II+ +SV G +G      Y ++K G++GL K+ A EL   GI VN V+P  + + +      L+D+    M + +  A   +  DIA    +L SD++K ++G  + V+GG
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 73/249 (29.32%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLI--ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            K AL+TG +RGIG   A   ++ G  V +  A  K+   E+V ++I            +  +V    +++  +   V+Q+G LD++ NNAG     + N+L    + E++ ++  NL G F   + A   M     G+II+ +SV G +G      Y ++K G++GL K+ A EL   GI VN V+P  + + +      L+D+    M + +  A   +  DIA    +L SD++K ++G  + V+GG
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIKAKGVDSFA---IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD---ALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 77/259 (29.73%), Postives = 122/259 (47.10%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLI---ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGA--ATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK--GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            L+GKVA +TG + GIG   A  +++ GA V I   +   DD  E + K                C+VT  +D+E  V    + +G +DI   NAG      P I      ++ +++ ++L   +        + +  G+GS I TAS+   I        AY ++K G+  L K+ +VE   F  RVN VSP  ++T L+    + AD  +   +  L   G   +P ++  A LYL SD +   +G +L VDGG+ +V
Sbjct:   33 LKGKVASVTGSSGGIGWAVAEGYAQAGADVAIWYNSHPADDKAEYLTKTYGVKSKAYK------CNVTDFQDVEKVVKQIESDFGTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPFA-RVNSVSPGYIATHLS----EFADPDVKSKWLQLTPLGREAKPRELVGAYLYLASDAASYTTGADLAVDGGYTVV 280          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 81/253 (32.02%), Postives = 118/253 (46.64%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFL---KLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            +L+GKVA+ITGG  GIG   A  F+K GA + I  + +    E   K I            +  DV  E   E AV   V  +GKLDI+ NNA      + +IL+    + E+    N+   F  TK A   ++     +II+T S+    G  A   Y+S+K  ++   ++ A  L   GIRVN V+P  + TPL        K+   GL        G   +P + A A + L SDES  ++G  + V+GG
Sbjct:   42 KLKGKVAIITGGDSGIGRAAAIAFAKEGADISILYLDEHSDAEETRKRIEKENVRCLL---IPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAE-QHPQDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQEGC--AIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPLIPATFPEEKVKQHGL----DTPMGRPGQPVEHAGAYVLLASDESSYMTGQTIHVNGG 284          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y4LA_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4lA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02730 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19
Identity = 71/253 (28.06%), Postives = 120/253 (47.43%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYS--NLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            R +GKVA++TG   GIG+  A   ++ G +V++AD+      +    I            +  D+   + +     TA   +G +D++ NNA  +     +  ILD D A +++ ++ NL G  L  + A   M   G G+I++ +S  G+ G  A  +YA SK  +  L  + A + G   IR N V+P ++ T   +  L   D  +    S   L   V  PED+A    +L SD++  ++G  + +DGG
Sbjct:    3 RFEGKVAVVTGAGAGIGKACALAIAREGGRVVVADLDGSAAIACTAQIAAEAGNALA---MAMDIADAQAVAALFETAERHFGGVDLLVNNASAMHLTPRDRAILDLDLAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTAQTSYAVSKAAMNMLSASLATQYGHAQIRCNAVAPGLIMT---ERLLAKLDKCMQRHLSRHQLLPRVGHPEDVAALVAFLLSDDASFITGQVVCIDGG 249          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: HCD2_MOUSE (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19
Identity = 65/206 (31.55%), Postives = 106/206 (51.46%), Query Frame = 2
Query:   89 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERILSINLVGAFLGTKHAARVM------KPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL 676
            R ++G VA++TGGA G    TA+     GA  ++ D+ D  GES  K +           +   +VT EK+I+ A+  A  ++G++D+  N AG    +K      ++     +F+R++++NL+G F   +  A  M      +   RG II+TASV    G     AY++SK G+ G+    A +L   GIRV  ++P + +TPL
Sbjct:    6 RSVKGLVAVVTGGASGPWLATAKRLVGQGATAVLLDVPDSEGESQAKKLGESCI------FAPANVTSEKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLAPTGIRVVTIAPGLFATPL 205          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 79/261 (30.27%), Postives = 117/261 (44.83%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHA-YASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVST-----------PLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL GKVAL+TG  RGIG   A    + GAKV++        E+  K +            +  DV     +   ++ AV  +G LDI+ +NAG V     ++ D    EF+R+  +N  G F   + A R ++  GR  II T+S    + G   HA Y+ SK  +   ++  A++ G   I VN V+P  + T           P  + F     D      S L    L P D+A    +L SD ++ +SG  + VDGG
Sbjct:    8 RLDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANS--REAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIVSSNAGIVS--FGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHLREGGR--IILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGL-PVDVARVVSFLASDAAEWISGKIIGVDGG 261          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
FABG_STAAS8.067e-2029.323-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR8.067e-2029.323-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN8.067e-2029.323-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM8.067e-2029.323-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC8.067e-2029.323-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
SOU2_CANAL1.054e-1929.73Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
YHDF_BACSU1.797e-1932.02Uncharacterized oxidoreductase yhdF OS=Bacillus su... [more]
Y4LA_RHISN1.797e-1928.06Uncharacterized short-chain type dehydrogenase/red... [more]
HCD2_MOUSE2.347e-1931.553-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musc... [more]
STCU_EMENI3.066e-1930.27Versicolorin reductase OS=Emericella nidulans GN=s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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