CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 79/268 (29.48%), Postives = 130/268 (48.51%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKD----DLGESV--CKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYG-KLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKP------AGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVN 853
            +L+ KVA++TGG  GIG      F+  GA V    +K     D  E++   +DI            +  D+  + +    V+     YG  +DI+ NNA    E +P+I D  + + ER+   N+   F  +KHA + M+       AG  SII+T+S+    G      Y ++K  ++   +  A++L   GIRVN V+P  + TPL       A++ +    S +  G   +P ++A + ++L SD++  +SG  L V+GG  IVN
Sbjct:   37 KLKDKVAIVTGGDSGIGRAVCLCFALEGATVAFTYVKGQEEKDAEETLRALRDIRARTGAKDPMA-IPADLGYDDNCRKVVDEVAGAYGGAIDILVNNAAEQYE-RPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLIP--ASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDDASYMSGQMLHVNGG-VIVN 299          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.229e-19
Identity = 74/253 (29.25%), Postives = 119/253 (47.04%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGE----SVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGL-GGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            L G+VA++TG +RGIG   A   ++ GAKV+I    +        S+  +                DV +   +    +TA   +G L I+ NNAG  D   P +      E++RI  +N  GAFL ++ AA+ +   G G II+ +S    +      AY +SK  +  + +  A EL    I  NCV+P  V+T +   F   ++  +  G+ SN    + + ED+A    +L SDE + V+   + V+GG
Sbjct:   19 LGGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMF--FAGKSEAAVEAGVKSNPFERLGKVEDVAPLVAFLASDEGEWVNAQVVRVNGG 269          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHB8_PIG (Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 71/256 (27.73%), Postives = 127/256 (49.61%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXX----YVHCDVTKEKDIENAVNTAVTQYGKL-DIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL+  +AL+TG   GIG   +   +  GA V   D+     +   + +                   DV++ +     +      + +   ++ + AG T DE    +L   + ++++++++NL G FL T+ AA+ +  +G  GSII+ +S+ G +G      YA+SK G++GL +  A ELGR+ IR N V P  + TP+A+   +   D + GM     G +  P D+A+   +L S++S  ++G ++ V GG
Sbjct:    6 RLRSALALVTGAGSGIGRAVSVRLAAEGAAVAACDLDGAAAQETVQLLGGPGSEKGAPSGPMAAFQADVSEAETARRLLEQVQAYFFRPPSVVVSCAGITRDEF---LLRMSEDDWDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISSIIGKVGNMGQTNYAASKAGVIGLTQAVARELGRYRIRCNSVLPGFIKTPMAQKVPQKVLDKVVGMIP--MGHLGGPPDVADVVAFLASEDSGYITGASVEVTGG 256          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHK2_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 2 OS=Streptomyces violaceoruber GN=gra-orf6 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 73/251 (29.08%), Postives = 119/251 (47.41%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKD---FLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            +  VAL+TG + GIG+  A+  +  G +V++   +        +D            YV  DV++E D    V+TAV  YG+LD++ NNAG    +    L     E +  IL +N++G +  T  A   +  +G GS+++ +S+ G     ++  YA S  G     +  A  +G   +RVN V+P ++ TP  ++   F  +A+           G    PED+AEA   LG   +   +G  L+VDGG
Sbjct:    7 EAPVALVTGSSSGIGQTVAQRLAAEGYRVVVNSARS------VEDGEKTAAALPDALYVRADVSEEADARRLVDTAVEHYGRLDVLVNNAGRTRAIPHADLAAATPEVWREILGLNVIGTWQTTVAAMPHLARSGNGSVVNVSSIAGSRPAGSSIPYAVSNGGHRAQTRLLANTVGP-AVRVNAVAPGLIETPWTQNSDFFAPIAEHVRQTTPLRRTG---RPEDVAEAV--LGLVRATYTTGQVLLVDGG 245          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YQC8_SCHPO (Uncharacterized oxidoreductase C1739.08c OS=Schizosaccharomyces pombe GN=SPCC1739.08c PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 75/252 (29.76%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH--AYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL-AKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 841
            L+GK  ++ G A+GIG   A  F++ G  V+I  +  D  E   K              +  D+++   +E  V      + ++ ++  NAG     + ++LD+   EFE++++IN    +    +  ++ K  G G++I+TAS+   I  A  H  AY +SK  +  L K  AVE   F  R+N VSP   +T +   +FLK  +      Y   K   L PE +    LYL S+ S  V+G +L+VDGG+
Sbjct:   19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK---LAEETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHVVVANAGM--PFRRSVLDSPPHEFEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWAEFA-RINSVSPGYFATDMPGYEFLKQWEP-----YVPFKRLGLTPE-LRGTYLYLASNASSFVTGLDLIVDGGY 258          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YHXC_BACSU (Uncharacterized oxidoreductase yhxC OS=Bacillus subtilis GN=yhxC PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 76/255 (29.80%), Postives = 119/255 (46.67%), Query Frame = 2
Query:   89 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVN 853
            ++L+GK A+ITGG  GIG   + LF+K GA V+I  + +       K              +  DV  E    + V  A   +  +DI+ NNA     V+P+I      +  R    N+   F  TK     +K     SII+TAS+    G      Y+++K  ++   ++ +  L + GIRVN V+P  + TPL        D  + G    ++    +P ++A + LYL SD+S  V+G  + V+GG  IVN
Sbjct:   37 KKLEGKTAIITGGDSGIGRAVSVLFAKEGANVVIVYLNEHQDAEETKQ--YVEKEGVKCLLIAGDVGDEAFCNDVVGQASQVFPSIDILVNNAAE-QHVQPSIEKITSHQLIRTFQTNIFSMFYLTKAVLPHLKKG--SSIINTASITAYKGNKTLIDYSATKGAIVTFTRSLSQSLVQQGIRVNAVAPGPIWTPLIPASFAAKDVEVFGSDVPMERPG-QPVEVAPSYLYLASDDSTYVTGQTIHVNGG-TIVN 284          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 63/229 (27.51%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALY 781
            L  KVA++TG   GIGE  A L  + GAKV++A    +  ++V   +            V  DVT +++++  +  A   +G LDI+ N+AG +  +   I D    E++ ++ +N+ G     + A   M     G +I+ AS+ G     ++  Y+++K  +  + +    EL + G++V  +SP +V T +               Y+      LEP+DIAEA LY
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-----SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM--LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT------------AAYNPTDRKKLEPQDIAEAVLY 213          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 63/229 (27.51%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALY 781
            L  KVA++TG   GIGE  A L  + GAKV++A    +  ++V   +            V  DVT +++++  +  A   +G LDI+ N+AG +  +   I D    E++ ++ +N+ G     + A   M     G +I+ AS+ G     ++  Y+++K  +  + +    EL + G++V  +SP +V T +               Y+      LEP+DIAEA LY
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-----SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM--LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT------------AAYNPTDRKKLEPQDIAEAVLY 213          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 63/229 (27.51%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALY 781
            L  KVA++TG   GIGE  A L  + GAKV++A    +  ++V   +            V  DVT +++++  +  A   +G LDI+ N+AG +  +   I D    E++ ++ +N+ G     + A   M     G +I+ AS+ G     ++  Y+++K  +  + +    EL + G++V  +SP +V T +               Y+      LEP+DIAEA LY
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQL-----SQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQM--LSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT------------AAYNPTDRKKLEPQDIAEAVLY 213          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y2146_BRAJA (Probable short-chain type dehydrogenase/reductase blr2146 OS=Bradyrhizobium japonicum GN=blr2146 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 70/256 (27.34%), Postives = 123/256 (48.05%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPN--ILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-----EPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            R +GKVA++TG   GIG+  A   ++ G +V++ADI      +    I            +  D+   + +     TA   +G +D++ NNA  +     +  IL+ + A +++ ++ NL G  L  + A   M   G G+I++ +S  G+ G  A  +YA+SK  +  L  + A + G   IR N V+P ++ T   +  L   D     M ++L+   L      PED+A    +L SD++  ++G  + +DGG
Sbjct:    3 RFEGKVAVVTGAGAGIGKACALAIAREGGRVVVADIDGSAAIACTAQIAAEAGHALA---LAIDIADAQAVAALFETAERHFGGVDLLVNNASAMHLTPRDRAILELELAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTALTSYAASKAAMNMLSSSLATQYGHAQIRCNAVAPGLIMT---ERLLAKLD---ACMQTHLRRHQLLPRVGRPEDVAALVAFLLSDDAAFITGQVVCIDGG 249          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GRDH_ORYSJ4.004e-1929.48Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]
SDR1_PICAB5.229e-1929.25Short-chain type dehydrogenase/reductase OS=Picea ... [more]
DHB8_PIG6.830e-1927.73Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN... [more]
DHK2_STRVN8.920e-1929.08Granaticin polyketide synthase putative ketoacyl r... [more]
YQC8_SCHPO1.165e-1829.76Uncharacterized oxidoreductase C1739.08c OS=Schizo... [more]
YHXC_BACSU1.165e-1829.80Uncharacterized oxidoreductase yhxC OS=Bacillus su... [more]
Y2778_STAA81.165e-1827.51Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC1.165e-1827.51Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA31.165e-1827.51Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
Y2146_BRAJA1.165e-1827.34Probable short-chain type dehydrogenase/reductase ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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