CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: UXUB_BACSU (Uncharacterized oxidoreductase uxuB OS=Bacillus subtilis GN=uxuB PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16
Identity = 75/269 (27.88%), Postives = 120/269 (44.61%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-----------TVDEVKP--NILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSN--LKGAVL----EPEDIAEAALYLGSDE-SKCVSGHNLVVDGGF 841
            L GK A+ITGG+  +    AR  ++HG KV I +   + G++V K+I            V  DV     +E A    + Q+G +D++ N AG           T +E     +  D D+  F  + S N  GAFL ++   + +  A   +II+ +S+          AY+++K  +       AV     G+RVN ++P    T    D L +  DG     S+  + G  +    +PED+    L+L  +  S  V+G  + VDGGF
Sbjct:    8 LAGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAVVKEITAAGGTACA---VAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLL-INQDGTFTSRSHKIIAGTPMKRFGKPEDLLGTLLWLADESYSGFVTGITVPVDGGF 272          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: ARDH_CANTR (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida tropicalis GN=ARD PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16
Identity = 70/265 (26.42%), Postives = 121/265 (45.66%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVH---------CDVTKEKDIENAVNTAVTQYGKL-DIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAAR-VMKPAGRGSIISTASVCGIIGGAATHA--YASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDE-SKCVSGHNLVVDGGF 841
            RL GK+ +ITGG+ G+    +R     GA + + D+  +  +   +D+           +           C++   + +E         +GK+  ++ N AG  +           AE   I+ +N +G+F  ++  AR +++    GSII   S+ G I         Y  SK G++ L ++ A E  ++ IRVN +SP  + TPL ++ +    +      S +    + EP++   + LYL SD  S   +GHNLVVDGG+
Sbjct:   17 RLDGKLVIITGGSGGLSAVVSRALLAKGADIALIDMNLERTQQAARDVLQWGEEQMKGKHESPIGQVSAWSCNIGDAEAVELTFKAINEHHGKVASVLINTAGYAENFPAEEYPAKNAE--NIMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLTRNVISGHTEMKTEWESKIPMKRMAEPKEFVGSILYLASDSASSYTTGHNLVVDGGY 279          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16
Identity = 63/251 (25.10%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR-GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 841
            L+GKVA++TG   G+G+  A   ++ G  ++  +I +       + I            +  D+ K   I   ++ AV ++G +DI+ NNAG +   + + L+  + +++ ++++N+   F  ++ AA+     G  G II+ AS+    GG    +Y +SK G++G+ +  A E  +  I VN ++P  ++T   +  L+  +     +   +  G    P D+    ++L S  S  V+G+ + VDGG+
Sbjct:    8 LEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPT-----ETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIR--REDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ-LRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGW 250          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_MYCAV (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium avium GN=fabG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16
Identity = 64/246 (26.02%), Postives = 112/246 (45.53%), Query Frame = 2
Query:  113 LITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDG-LGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            L+TGG RGIG   A+  +    KV +        + +                V CDVT    ++ A        G ++++ +NAG   +    ++   +  F  +++ NL GAF  T+ AAR M+    G II   SV G+ G      YA++K GL+G+ ++ + EL + G+  N V+P  + T + +   +    G L  + +   G   E   +  A  +L S+++  ++G  + VDGG  +
Sbjct:   27 LVTGGNRGIGLAIAQRLAAEAHKVAVTHRGSGAPDGLFG--------------VECDVTDNDAVDRAFTEVEEHQGPVEVLVSNAGISKDAF--LIRMTEERFTEVINANLTGAFRVTQRAARSMQKKRFGRIIYIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELSKAGVTANVVAPGYIDTEMTRALDERIQAGALEFIPAKRVGTAAE---VPGAVSFLASEDASYIAGAVIPVDGGMGM 253          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHB8_CALJA (Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Callithrix jacchus GN=HSD17B8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16
Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  416 EFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSG 814
            ++++++++NL G FL T+ A + +  +G  GSII+ +S+ G +G      YA+SK G++GL +  A ELGR GIR N V P  ++TP+ +   +   + + GM     G + +PED+A+   +L S++S  ++G
Sbjct:    1 DWDKVIAVNLKGTFLVTQAAGQALVSSGCSGSIINISSIVGKVGNMGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVMNKITGMIP--MGHLGDPEDVADVVAFLASEDSGYITG 132          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y1627_STAS1 (Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.411e-16
Identity = 62/231 (26.84%), Postives = 108/231 (46.75%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFG--IRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALY 781
            ++ KV +ITG + GIGE T  L S++GAK+++   + D  E + + +               DVTK  ++   + TA   +G++D++ NNAG + +    +  N Q E+ +++ +N+ G   G       M+    G II+ ASV G +    +  Y  +K+ +  + +    E    G  IR   +SP  VST L      ++D  +      L    ++P+ IA A  Y
Sbjct:    4 VKDKVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQQKVGHDSVSIK-----KTDVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQ--SFLEKNKQDEWNQMIDVNIKGVLYGIGAVLPYMRKQKSGHIINLASVAGHVVFPGSAVYCGTKYAVRAITEGLRQEEAIVGSNIRTTILSPGAVSTELTD---HISDKDMKQDIDELYKNAIKPDAIARAINY 224          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.411e-16
Identity = 69/250 (27.60%), Postives = 112/250 (44.80%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSD-ESKCVSGHNLVVDG 835
            L+ KV ++TGG RGIG    +L  + GAKV   D+  D G +    +                V    D+E+    A     KL  ++         K N       A+++ +L++NL G     K     M     GSI++ +S+ G  G      Y+++K G++G+MK+ A E  R+G+R N V+P  + T +    L + +D    +   +      +PE+IA A  +L S   S  V+G  L V+G
Sbjct:    6 LEDKVIVVTGGNRGIGAAIVKLLQEMGAKVAFTDLATDGGNTEALGV----------------VANVTDLESMTAAAAEITDKLGPVYGVVANAGITKDNFFPKLTPADWDAVLNVNLKGVAYSIKPFIEGMYERKAGSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMT---LAIREDIREKITKEIPFRRFGKPEEIAWAVAFLLSPVASSYVTGEVLRVNG 236          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHB4_HUMAN (Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.411e-16
Identity = 60/194 (30.93%), Postives = 93/194 (47.94%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-----GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSP 655
            R  G+V L+TG   G+G   A  F++ GA V++ D+  D      G      +             + D  +E   E  V TA+  +G++D++ NNAG + D     I D D   ++ I  ++L G+F  T+ A   MK    G II T+S  GI G      Y+++K GLLGL  + A+E  +  I  N ++P
Sbjct:    6 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEG--EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDED---WDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAP 194          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: Y0585_STAHJ (Uncharacterized oxidoreductase SH0585 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0585 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16
Identity = 60/229 (26.20%), Postives = 103/229 (44.98%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALY 781
            L G+VA+ITG + GIG  TA+   K G KV++A    D   ++ KD+            V  DVT + +++  V   +  +G +DI  N AG +   K  I D     ++ ++  N+ G            +  G G +++ AS+        +  Y+++K  +L +      EL + GI+   + P +V TP+ +          GG         L+PE+IA+A +Y
Sbjct:    4 LNGRVAIITGASSGIGAATAKALEKQGVKVVLAGRSHDKLNTLAKDM-----NEDNIHIVPTDVTNQVEVDALVAKVIDVFGHVDIFVNCAGVMRSSK--ITDYQVESWDSMVDTNIKGLLYSLNAILPKFEAQGSGHVVNLASISANEVSKESALYSATKSAVLMIFNGLEKELAKTGIKTTSILPGMVDTPMTE------RSDFGGRKK------LDPENIADAIIY 213          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16
Identity = 62/255 (24.31%), Postives = 117/255 (45.88%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXY--VHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKD-FLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            L+ +VA++TGG  GIG+  +R     G  V+IA  K D   +   ++              + C++ KE+++ N V + + +YGK++ + NN G   +    + D     +  ++  NL G F   K           GSI++   +       A H   +++ G+  L K+ A+     G+R+NCV+P  + +  A D + ++        + ++    L  PE+I+    +L S  +  ++G  + VDGG A+
Sbjct:   16 LKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLDRLTAAVDELRASLPPSSSAEVSAIQCNIRKEEEVSNLVKSTLAKYGKINFLVNNGG--GQFMAPVEDITAKGWHAVIETNLTGTFYMCKEVYNSWMREHGGSIVNIIVLLNNGFPTAAHT-GAAREGVYNLTKSMALAWASSGVRINCVAPGTIYSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFLLSPAASYITGQLINVDGGQAL 267          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
UXUB_BACSU3.172e-1627.88Uncharacterized oxidoreductase uxuB OS=Bacillus su... [more]
ARDH_CANTR3.172e-1626.42D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
KDUD_ECOLI4.143e-1625.102-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_MYCAV4.143e-1626.023-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
DHB8_CALJA4.143e-1634.33Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Ca... [more]
Y1627_STAS15.411e-1626.84Uncharacterized oxidoreductase SSP1627 OS=Staphylo... [more]
FABG2_SYNY35.411e-1627.603-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
DHB4_HUMAN5.411e-1630.93Peroxisomal multifunctional enzyme type 2 OS=Homo ... [more]
Y0585_STAHJ7.067e-1626.20Uncharacterized oxidoreductase SH0585 OS=Staphyloc... [more]
PECR_MOUSE7.067e-1624.31Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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