CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933903_ssr242 microsatellite CK933903_ssr242:242..253. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:3..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YTKK_BACSU (Putative oxidoreductase ytkK OS=Bacillus subtilis GN=ytkK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 65/250 (26.00%), Postives = 108/250 (43.20%), Query Frame = 2
Query:  110 ALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTA--SVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVN 853
            ALIT G++G+G          G  V +   +D+  E+V +             +V  DVTK++D+      A+ ++G++D + NNAG     +  + D    E+  +L  NL   F   K    +M+    G II+          G     A+ ++K GL  L K  A+E   FGI  N V P  +   + +  ++ A   +G   + + G     EDIA    +L  + S  V+G  +   GG  ++N
Sbjct:    4 ALITAGSKGLGRKVTETLLAKGYSVTVNYRQDE--EAVSRLKEACPDCLDRLQFVKGDVTKKEDLLRIAEAALNRFGRIDFLINNAGPYIFERKKLADYTDDEWYGMLEGNLSAVFHLFKAVIPIMRKQQFGRIITYGFQGAAHAPGWLHRSAFGAAKVGLASLTKTIAIEEAEFGITANMVCPGDIVGDMKEASIEEARMRIGKEKTPI-GRSGTGEDIARIIAFLCEENSDLVTGTVIEATGGLNVIN 250          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: TODD_PSEP1 (Cis-toluene dihydrodiol dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todD PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSP 655
            RL+G+VAL+TGG  G+G      +   GA+V + D K   G    + +            V  DV        AV   V  +GKLD +  NAG  D +    +I D+  +E FE +  +N+ G  L  K A   +  + +GS I T S  G   G     Y + KH ++GL+K  A E G   IRVN ++P
Sbjct:    2 RLEGEVALVTGGGAGLGRAIVDRYVAEGARVAVLD-KSAAGLEALRKLHGDAIVG-----VEGDVRSLDSHREAVARCVEAFGKLDCLVGNAGVWDYLTQLVDIPDDLISEAFEEMFEVNVKGYILAAKAALPALYQS-KGSAIFTVSNAGFYPGGGGVLYTAGKHAVIGLIKQLAHEWGP-RIRVNGIAP 184          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 68/252 (26.98%), Postives = 115/252 (45.63%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLI-----ADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHA-YASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLK--------LADDGLGGMYSNLK--GAVLEPEDIAEAALYLGSDESK 802
            L GKVAL+TG  RGIG   A    + GAKV++     A+  +++ +++ K              +  +V+    I      A   +G+LDI+ +N+G V     ++ D    EF+R+ +IN  G F   + A + ++  GR  +I   S+ G   G   HA Y+ SK  +   ++  A++ G   I VN V+P  + T + +D  +        L D+G+    +       V  P DIA    +L S + +
Sbjct:   27 LMGKVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKS-------GSDAASIKANVSDVDQIVKMFGEAKQIWGRLDIVCSNSGVVS--FGHVKDVTPEEFDRVFAINTRGQFFVAREAYKHLEVGGR--LILMGSITGQAKGVPKHAVYSGSKGTIETFVRCMAIDFGDKKITVNAVAPGGIKTDMYRDVCREYIPNGGELDDEGVDEFAAGWSPMHRVGLPIDIARVVCFLASQDGE 267          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: DHB13_MOUSE (17-beta hydroxysteroid dehydrogenase 13 OS=Mus musculus GN=Hsd17b13 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 63/233 (27.04%), Postives = 102/233 (43.78%), Query Frame = 2
Query:   89 RRLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVE---LGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAAL 778
            + + G+  LITG   GIG  TA  F+K  +++++ DI +  G     D             V C  +   +I N+V+    + G ++I+ NNAG +     ++L     E  +   +N++G F   K     M     G I++ ASVCG         Y SSK   +G  +    E   LG+ GI+ +C+ P  V+T   K+             S     VLEPE++A + +
Sbjct:   32 KSVTGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDI-NKRGVEETADKCRKLGAVVHVFVVDC--SNRAEIYNSVDQVKREVGDVEIVVNNAGAI--YPADLLSAKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNTGFTKN------------PSTRLWPVLEPEEVARSLI 247          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: BNZE_PSEPU (Cis-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Pseudomonas putida GN=bnzE PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKP--NILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSP 655
            RL+G+VAL+TGG  G+G      +   GA+V + D K   G    + +            V  DV        AV   V  +GKLD +  NAG  D +    +I D+  +E FE +  +N+ G  L  K A   +  + +GS I T S  G   G     Y + KH ++GL+K  A E G   IRVN ++P
Sbjct:    2 RLEGEVALVTGGGAGLGRAIVDRYVAEGARVAVLD-KSAAGLEALRKLHGDAIVG-----VEGDVRSLDSHREAVARCVEAFGKLDCLVGNAGVWDYLTQLVDIPDDLISEAFEEMFEVNVKGYILAAKAALPALYQS-KGSAIFTVSNAGFYPGGGGVLYTAGKHAVIGLIKQLAHEWGP-RIRVNGIAP 184          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YGHA_ECOLI (Uncharacterized oxidoreductase yghA OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.925e-13
Identity = 75/252 (29.76%), Postives = 121/252 (48.02%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL+ + AL+TGG  GIG   A  +++ GA V I+   ++++  + V K I            +  D++ EK   + V+ A    G LDIM   AG    + P+I D    +F++  +IN+   F  T+ A  ++ P G  SII+T+S+           YA++K  +L   +  A ++   GIRVN V+P  + T L     +  D     G  + +K A  +P ++A   +YL S ES  V+     V GG
Sbjct:   46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII---EECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLL-PKG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG-QPAELAPVYVYLASQESSYVTAEVHGVCGG 290          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YGHA_ECO57 (Uncharacterized oxidoreductase yghA OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.925e-13
Identity = 75/252 (29.76%), Postives = 121/252 (48.02%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIA--DIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADD-GLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 838
            RL+ + AL+TGG  GIG   A  +++ GA V I+   ++++  + V K I            +  D++ EK   + V+ A    G LDIM   AG    + P+I D    +F++  +IN+   F  T+ A  ++ P G  SII+T+S+           YA++K  +L   +  A ++   GIRVN V+P  + T L     +  D     G  + +K A  +P ++A   +YL S ES  V+     V GG
Sbjct:   46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII---EECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLL-PKG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG-QPAELAPVYVYLASQESSYVTAEVHGVCGG 290          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: MTDH_ALTAL (Probable NADP-dependent mannitol dehydrogenase OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 69/259 (26.64%), Postives = 120/259 (46.33%), Query Frame = 2
Query:   95 LQGKVALITG--GARGIGECTARLFSKHGAKVLIA-DIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH--AYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            L+GKV ++TG  G  GIG   AR  +++GA + I  + + +  E   K++              C V +    E  V   +  +GK+D+   NAG T D     ILD    ++  ++  +L G F   +      +    GS++ T+S+ G I        +Y  +K G + L K+ A E   F  RVN +SP  + T L+ DF+      +  ++ ++   G   +  ++  A +Y  SD S   +G +L++DGG+ +
Sbjct:   17 LKGKVVIVTGASGPTGIGTEAARGCAEYGADLAITYNSRAEGAEKNAKEMSEKYGVKVKAY--KCQVNEYAQCEKLVQDVIKDFGKVDVFIANAGKTADN---GILDATVEQWNEVIQTDLTGTFNCARAVGLHFRERKTGSLVITSSMSGHIANFPQEQASYNVAKAGCIHLAKSLANEWRDFA-RVNSISPGYIDTGLS-DFV---PQDIQKLWHSMIPMGRDAKATELKGAYVYFASDASSYCTGSDLLIDGGYCV 265          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 50/187 (26.74%), Postives = 94/187 (50.27%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTV-DEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSP 655
            +G+VAL+TGG  GIG      F++ GA V++ D+ +   + V  +I           +        +D +  V  A+  +G++DI+ NNAG + D+   N+   D + ++ +++++  G +  TK A         G +++T S  GI G      Y+++K  +LG  +  A+E  ++ I VN ++P
Sbjct:  313 KGRVALVTGGGAGIGRAYCLAFARAGASVVVNDLVNP--DDVVNEIKKMGGKAVGAKF------SAEDGDAVVKAAIDAFGRVDIVVNNAGILRDKAFHNM---DDSLWDPVMNVHARGTYKVTKAAWPYFLKQKYGRVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALEGAKYNIYVNTIAP 488          

HSP 2 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 51/211 (24.17%), Postives = 100/211 (47.39%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADI----KDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVK-PNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVS----TPLAKDFLKL 697
            R  G+V ++TG   G+G+     F   GA V++ D+    K +   +   D+            V  +    ++ +  + TA+ ++G++DI+ NNAG + ++   N+ D D   ++ I  +++ G++   + A    +    G +I+TAS  G+ G      Y+++K G++G  +  A E  ++ I  N ++P   S    T +  D L L
Sbjct:    6 RFDGQVVVVTGAGGGLGKAYCLFFGSRGASVVVNDLGASFKGEGNSTKAADVVVNEIKAAGGKAV-ANYDSVENGDKIIETAIKEFGRIDILINNAGILRDISFKNMKDED---WDLIFKVHVKGSYKTARAAWPYFRKQKFGRVINTASAAGLFGNFGQANYSAAKLGMVGFTETLAKEGLKYNIISNVIAPIAASRMTETVMPPDLLAL 212          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABL_BACSU (Enoyl-[acyl-carrier-protein] reductase [NADPH] OS=Bacillus subtilis GN=fabL PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 60/251 (23.90%), Postives = 113/251 (45.02%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            Q K AL+TG +RG+G+  A   +++G  ++I   +    ++  +              V  +V +   I+         +G+LD+  NNA +   V   +++ ++  ++  ++IN        + AA++M+  G G I+S +S+  I           SK  L  L +  AVEL    I VN VS   + T   K F    D       +   G ++E +D+ +   +L S ++  + G  ++VDGG +++
Sbjct:    3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLL 249          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
YTKK_BACSU1.474e-1326.00Putative oxidoreductase ytkK OS=Bacillus subtilis ... [more]
TODD_PSEP11.474e-1332.46Cis-toluene dihydrodiol dehydrogenase OS=Pseudomon... [more]
THR1_GLOLA1.474e-1326.98Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
DHB13_MOUSE1.474e-1327.0417-beta hydroxysteroid dehydrogenase 13 OS=Mus mus... [more]
BNZE_PSEPU1.474e-1332.46Cis-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=P... [more]
YGHA_ECOLI1.925e-1329.76Uncharacterized oxidoreductase yghA OS=Escherichia... [more]
YGHA_ECO571.925e-1329.76Uncharacterized oxidoreductase yghA OS=Escherichia... [more]
MTDH_ALTAL2.514e-1326.64Probable NADP-dependent mannitol dehydrogenase OS=... [more]
FOX2_NEUCR2.514e-1326.74Peroxisomal hydratase-dehydrogenase-epimerase OS=N... [more]
FABL_BACSU2.514e-1323.90Enoyl-[acyl-carrier-protein] reductase [NADPH] OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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