CK933903

Overview
NameCK933903
Unique NameCK933903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933903_ssr242 microsatellite CK933903_ssr242:242..253. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1886 contig Csv1_Contig1886:3..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.377e-25
Identity = 79/248 (31.85%), Postives = 123/248 (49.60%), Query Frame = 2
Query:  104 KVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 847
            KV  + GG+RGIG+  A+L ++   KV +     ++ ++   +I            + CDV+KE +I+          G +D + N+AG   +    +L     +   +LSINLVG     K A + M     GSI++  S+ G  G      Y +SK GL+G  K+ A E+ +  IRVN V+P  + T +  D   L +D L  M     G   EPE++A++ L+L   ES  ++GH LVVDGG  +
Sbjct:    3 KVCAVFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEIGAHLA-------LSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRDAL--LLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSD---LKEDSLNKMIP--LGRFGEPEEVAQSVLFL--LESPYITGHVLVVDGGLQL 234          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 86/255 (33.73%), Postives = 127/255 (49.80%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH--AYASSKHGLLGLMKNTAVELGRFGIRVNCVSP-YVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            L+GK A++ GGARGIG     +F++ GA   I       GE   K+I              CDVT  K++E+A       +  +DI+  N G       + +D    EF   +++NL+G F    +A  + +  G GS+++TAS+ G++        AY +SK G++ L+K+ AVE  +F  RVNCVSP Y  S      F K  +      Y+  +   L  E IA A LYL SD +   SG NL+VDGG+  +
Sbjct:   19 LKGKNAVVFGGARGIGHAICSVFAEAGANAFIV-YNTTPGEKAAKEIAQANGVKTYTC--KCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGIC--TGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKFA-RVNCVSPGYTTSDMTGGKFHKEWEP-----YTPFERNGLAKE-IASAYLYLASDAASYASGTNLIVDGGYTSI 261          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 80/254 (31.50%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDN-DQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            L+GKVAL+TG +RGIG+  A L ++ GAKV I     + G     D             +  +VT  + IE  +     ++G +DI+ NNAG     + N+L    + E+  I+  NL   F  +K   R M    +G II+  SV G +G A    YA++K G++G  K+ A E+   G+ VN V+P  + T + K    L D+      + +  G + +P +IA A  +L S E+  ++G  L V+GG  ++
Sbjct:    3 LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----MALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK---ALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 83/253 (32.81%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            +GK+AL+TG +RGIG   A      GAKV    I     E+  K+I            ++  VT    IE+ +     ++G++DI+ NNAG T D +   + D+   E+  I+  NL   F  +K   R M     G II+  SV G +G A    YA++K GL+G  K+ A E+   GI VN V+P  + T + +    L+DD   G+ + +  G +   ++IA A  +L SDE+  ++G  L V+GG  +V
Sbjct:    4 EGKIALVTGASRGIGRAIAETLVARGAKV----IGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD---EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 83/253 (32.81%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            +GK+AL+TG +RGIG   A      GAKV    I     E+  K+I            ++  VT    IE+ +     ++G++DI+ NNAG T D +   + D+   E+  I+  NL   F  +K   R M     G II+  SV G +G A    YA++K GL+G  K+ A E+   GI VN V+P  + T + +    L+DD   G+ + +  G +   ++IA A  +L SDE+  ++G  L V+GG  +V
Sbjct:    4 EGKIALVTGASRGIGRAIAETLVARGAKV----IGTATSENGAKNISDYLGANGKGLMLN--VTDPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDD---EWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 77/255 (30.20%), Postives = 129/255 (50.59%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 847
            +++  V ++TG +RGIG+  A    K G KVL+   +     E V K I               DV+KE D+E  + TA+  +G +D++ NNAG   +    ++   +++++ ++ +NL G FL T+ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PED+A    +L  S  +  ++G    +DGG AI
Sbjct:   69 KVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGG---DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 77/255 (30.20%), Postives = 129/255 (50.59%), Query Frame = 2
Query:   92 RLQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDL-GESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 847
            +++  V ++TG +RGIG+  A    K G KVL+   +     E V K I               DV+KE D+E  + TA+  +G +D++ NNAG   +    ++   +++++ ++ +NL G FL T+ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PED+A    +L  S  +  ++G    +DGG AI
Sbjct:   74 KVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGG---DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 69/204 (33.82%), Postives = 112/204 (54.90%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAGTVDEVKPNILDNDQA----EFERILSINLVGAFLGTKHAARVM------KPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPL 676
            ++  V+L+TGGA G+G  TA   +K GA V++AD+    G  V K++           +V  DVT EKD+  A+ TA  ++G+LD+  N AGT   VK    + + A    +F+R+++IN VG F   + +A +M      +   RG I++TASV    G     AY++SK  ++G+    A +L   GIR+  ++P + +TP+
Sbjct:    2 IKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL------GDKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPM 199          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 85/262 (32.44%), Postives = 131/262 (50.00%), Query Frame = 2
Query:   95 LQGKVALITGGARGIGECTARLFSKHGAKVL--------IADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            L+GK+AL+TG +RGIG   A L  + GA V+         A I + LGE+                 +  +VT  + IE  + T   + G +DI+ NNAG T D +   + D+   E+  I++ NL   +  +K   R M     G II+  SV G +G A    YA++K G++G  K+ A E+   G+ VN V+P  + T + K    L DD      SN+  G + +P +IA A ++L S E+  ++G  L V+GG  +V
Sbjct:    3 LEGKIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGEN--------------GKGLALNVTDVESIEATLKTINDECGAIDILVNNAGITRDNLLMRMKDD---EWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK---ALNDDQRAATLSNVPAGRLGDPREIASAVVFLASPEAAYITGETLHVNGGMYMV 244          
BLAST of CK933903 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 78/253 (30.83%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   98 QGKVALITGGARGIGECTARLFSKHGAKVLIADIKDDLGESVCKDIXXXXXXXXXXXYVHCDVTKEKDIENAVNTAVTQYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 850
            +GK+AL+TG +RGIG   A   +  GAKV+     ++  +++   +            +  +VT    IE+ +     ++G++DI+ NNAG T D +   + D    E+  I+  NL   F  +K   R M     G II+  SV G +G      YA++K GL+G  K+ A E+   GI VN V+P  + T + +    L+DD   G+ + +  G +   ++IA A  +L SDE+  ++G  L V+GG  +V
Sbjct:    4 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG------LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
The following BLAST results are available for this feature:
BLAST of CK933903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
CBR4_XENLA6.377e-2531.85Carbonyl reductase family member 4 OS=Xenopus laev... [more]
YF3H_SCHPO8.329e-2533.73Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
FABG_VIBCH8.329e-2531.503-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_SALTY8.329e-2532.813-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SALTI8.329e-2532.813-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG3_BRANA8.329e-2530.203-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA8.329e-2530.203-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
HCD2_DROME1.088e-2433.823-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
FABG_VIBHA1.088e-2432.443-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_SHIFL1.088e-2430.833-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933903 ID=CK933903; Name=CK933903; organism=Citrus sinensis; type=EST; length=854bp
GGGGCAAGACACCATAACTTACCTTCATATTTTGGTTGCTGTGCGTGCTA
TAAGAATGGGCAGTGCTTCAGTTGTCTCAGCTGCAGCAAGAAGGCTACAA
GGCAAAGTGGCACTTATCACAGGAGGAGCAAGAGGCATTGGGGAATGCAC
TGCAAGGCTCTTCTCAAAACATGGAGCTAAAGTACTCATTGCAGATATTA
AAGATGACTTGGGCGAATCTGTATGCAAAGACATAGGCTCTTCATCATCA
TCAGCCAGCGGCTGCTCCTATGTCCATTGTGATGTAACCAAAGAGAAAGA
TATCGAAAACGCCGTTAACACGGCAGTCACTCAGTACGGAAAGCTAGACA
TTATGTTCAATAACGCCGGCACTGTGGATGAAGTCAAACCTAACATACTC
GATAACGATCAGGCTGAATTTGAGCGCATACTTTCCATTAACCTCGTTGG
CGCATTTTTGGGGACGAAACATGCTGCTAGGGTGATGAAACCCGCCGGAC
GAGGCAGCATAATTTCAACTGCGAGCGTTTGCGGAATCATTGGTGGCGCT
GCAACACATGCATACGCTAGTTCAAAGCATGGCCTTTTGGGGCTGATGAA
GAATACTGCTGTGGAGCTTGGACGATTTGGCATTAGGGTCAATTGTGTGT
CACCTTATGTGGTCTCAACTCCATTAGCTAAGGATTTTCTCAAGCTTGCT
GATGATGGTTTGGGCGGCATGTATTCAAATCTTAAGGGGGCTGTTCTTGA
GCCTGAGGATATAGCTGAAGCTGCTCTTTATTTGGGGAGTGATGAGTCTA
AGTGTGTGAGTGGGCATAATTTGGTCGTAGATGGAGGATTTGCTATTGTC
AATG
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