CK933910

Overview
NameCK933910
Unique NameCK933910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 71/223 (31.84%), Postives = 100/223 (44.84%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKF-------VTNGQTTSAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            L+  +AEF+ T   VF G  S +  N    N    P                      +ISG H+NPAVT      G   L +   Y I+Q++GST+A   L+        V +G+    F  SS VG+   A   E ++TF L++ +   A D +  ++G +A +AIG  V  N+L       ASMNP  S GPALV   +   W+Y V P +G      VY
Sbjct:   54 LQKLIAEFLGTYFLVFTGCAS-VVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLG----HISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKH-DVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNR--AIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLVAPTLGAIAGAWVY 268          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17
Identity = 69/233 (29.61%), Postives = 102/233 (43.78%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFFF 790
            LR   AE + T + VF G GS +        G                          +ISGGH NPAVT G + GG    +  I Y I+Q++G  +A  +L  + +GQ     TTS FA +        G    +A+V EIV+T   ++ +       ++   G  AP+AIG  +    L        S+NPA S   A+   +W+ +  W +WV P+IGG + G +Y   F
Sbjct:    2 LRKLAAELLGTFVLVFGGCGSVVFAAAFPELGIG----FVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLT--AIFLIVIIGATDRRAPPG-FAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQNTWALEQLWFFWVMPIIGGIVGGGIYRLLF 227          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17
Identity = 74/242 (30.58%), Postives = 106/242 (43.80%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX-------------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL-LKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK--KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW------SWDNHWVYWVGPLIGGGLAGIVYEF 784
            +  +AEFI T I VF G GS  A   +  +G  +P+                                  NISG H+NPAVT G +          + Y IAQLLG+     + L+    G  T     A A   G+  W A++ E+V TF L+ T+   A+D +  KG  G I    IG  V   I   G   G+S+NPA +FGP L          W+ + +Y +GP++G  LA + Y++
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGII----IGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17
Identity = 60/224 (26.79%), Postives = 103/224 (45.98%), Query Frame = 2
Query:  125 PDALRAALAEFISTLIFVFAGEGS----GMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            P+ L+  ++E ++T + VF   G+    G    +++  G +                        +ISG H+NPAVT       +   ++   YW AQ  G+  A  +L+ V            +G   W+A+V EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA+ S  +   W+Y++GP++G      VY +
Sbjct:   48 PNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLIVTVMIYATG---------HISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTGPH-WHALVIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTY 259          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17
Identity = 66/245 (26.94%), Postives = 107/245 (43.67%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF-FINQSHEQLPTTEY*AKSLPSMXVCT 865
            ++  +AE   T   +FAG G+ +  N+  +     P                      +ISG H NPAVT            +   Y  AQ+LG+T+A   L+ +  G+               ++V E ++TF L++ +   A D +  ++G +A +A+G  +  N+L  G   GASMNPA S GPA++   + + WVY VGP+ G       Y    F N+   ++  +    KS+  M   T
Sbjct:   47 IQKIIAEIFGTYFLIFAGCGA-VTINQSKNGQITFPGVAIVWGLAVMVMVYAVG----HISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQSLVLEFIITFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNKPLREITKSGSFLKSMNRMNSST 284          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17
Identity = 72/226 (31.86%), Postives = 98/226 (43.36%), Query Frame = 2
Query:  146 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGV----------GAWNAV---VFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            LAE I T    FAG GS +        G                          +ISG H+NPAVT G   GG   + +   Y IAQ+LG+  A  LL  + +G   + F L+ G           G +N V   V E+VMT   ++ +  +     K   G  AP+AIG  +    L        S+NPA S GPAL    W+    W++WV PL+GG L G++Y
Sbjct:    7 LAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIG----HISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASG--AAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGST--HGKAPAG-FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAIGQLWLFWVAPLLGGVLGGVIY 223          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16
Identity = 51/157 (32.48%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISG H+NP++T    V G     +  LY  AQ LG+T A L+   V  G      A    +   +A   E++ T  +V+   A    P + +LG +    IG ++   +L  G   G SMNPA S GPA+V+W +++ W+Y   P+IG  +  + Y
Sbjct:   98 HISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVY-GVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQ-NLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTY 252          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16
Identity = 67/220 (30.45%), Postives = 98/220 (44.55%), Query Frame = 2
Query:  149 AEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 808
            AEF+ TLI +FAG  + +   K   +GA T                       +ISG H+NPAVT       +       +Y  AQ++ S  A   LK V    T S       VG   A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL  G    ASMNP  + GPA+ + ++   WVY   P++G  +    Y    + +  E
Sbjct:   84 AEFVGTLILIFAGTATAIVNQKT--DGAET---LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDE 295          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L        S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G + GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L        S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
The following BLAST results are available for this feature:
BLAST of CK933910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
NIP11_ARATH3.006e-1731.84Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
AQPZ_PHOLL3.926e-1729.61Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQPM_METTM3.926e-1730.58Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
NIP22_ORYSJ5.127e-1726.79Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ORYSJ5.127e-1726.94Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_RHOPA8.746e-1731.86Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
NIP71_ARATH1.142e-1632.48Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP61_ARATH1.142e-1630.45Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
AQPZ_SHIFL1.492e-1632.75Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI1.492e-1632.75Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933910 ID=CK933910; Name=CK933910; organism=Citrus sinensis; type=EST; length=879bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGT
TCAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGT
CGCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCT
ATGTNAGTTTGCACGGATGTTGTATTTAA
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