CK933910

Overview
NameCK933910
Unique NameCK933910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 58/172 (33.72%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA-------------WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISG H+NPAV+FG  VGG       + Y IAQ++G+ +A  ++  + +G+  + F LS+G+ +                 V E+VMT  +   V   A D +  +    APIAIG  +    L        S+NPA S GPAL    W+    W++WV PLIG  + G +Y
Sbjct:   57 HISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGK--AGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMT-AMFLVVIMGATDAR--APAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            ISGGH NPAV+ G  V G +     + Y IAQ+ G+ +A  +L  +  G+      +FA +        G     A+V E+VMTF  +  +  +     +      APIAIG  +    L        S+NPA S G AL    W+    W++W+ PL G  +AGIV++
Sbjct:   57 ISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGST---HRRVPAGFAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVGGWALSQLWLFWIAPLFGAAIAGIVWK 222          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 48/162 (29.63%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFI 793
            +SGG +NPAV+    +   +S  R ++ W++Q++    A      +T G+   A +L  G      +  E+  T  L  TV  TA++ ++ +     PI I   +    L   A+ G  +NPA S G A+ +  + + HW+YW+GPL+G  LA  V++   I
Sbjct:  112 VSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETNFMAALPIGISLFIAHVALT--AYTGTGVNPARSLGAAVAARYFPHYHWIYWIGPLLGSILAWSVWQLLQI 271          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 65/242 (26.86%), Postives = 100/242 (41.32%), Query Frame = 2
Query:  104 HPREATHPDALR----AALAEFISTLIFVFAGEGSGMAFNKLTHNGANT-------PSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFI 793
            H R     D LR    AA+ EF  T +F++      +  N   H+ A T       P                       +SGG +NPAV+    +   IS  R ++ W  Q++    A      +T G+     AL  G      +  E+  T  L  TV  TA++ ++ +     PI I   +    L G  + G  +NPA S G A+ +  + + HW+YW+GPL+G  LA  V++   I
Sbjct:   34 HSRFNIDRDTLRNHFIAAVGEFCGTFMFLWCAY---VICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLFTNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETNFMAALPIGISLFMAHMALTG--YTGTGVNPARSLGAAVAARYFPHYHWIYWIGPLLGAFLAWSVWQLLQI 270          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            +ISG H+NPAVT G + GG       + Y +AQ++G  +A  +L  + +GQ     T+S FA +        G    +A+V E+VMT  +++ +       ++   G  APIAIG  +    L        S+NPA S G AL    W+    W++WV P++G  L  + Y+
Sbjct:   55 HISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMT--MMFLLVILGATDQRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYK 223          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 65/230 (28.26%), Postives = 97/230 (42.17%), Query Frame = 2
Query:  137 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            R  ++EF+ T   VF G GS +        G                           ISGGH NPAV+ G  V G       + Y +AQ+LG+ VA   L  +  G+       FA +        G    +A++ EI++T F LV  + +T      G     AP+AIG  +    L        S+NPA S G AL    W+    W++W+ P++GG +  +V++ F
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFAAAFPELGIG----FLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVG----FAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIF 224          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14
Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 754
            +ISG H+NPAV+    V G++     + Y  AQ+LGS  A   +K + +        +   VG   A   E V TF L++ + A A DP   ++  +  +A+G  +  N L  G   GASMNPA + GPA+ +  +   WVY V   +G
Sbjct:  147 HISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGMYHPVNPGIVTVPK-VGTVEAFFLEFVTTFVLLFIITALATDPN--AVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGRYTQIWVYLVATPLG 292          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14
Identity = 58/182 (31.87%), Postives = 89/182 (48.90%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 808
            +ISG H+NPAVT G + GG         Y IAQ++G  +A  +L  +  GQ       S FA ++G G  +        A+V EIVMT  +++ +       K+   G  APIAIG  +    L        S+NPA S   A+    W+    W++WV P++GG L  ++Y+     +S++
Sbjct:   55 HISGCHLNPAVTVGLWAGGRFDTKDVAPYIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFA-ANGYGEHSPGQYSMLAALVSEIVMT--MMFLIVIMGATDKRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTAVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNLLGKESND 232          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP_ENCCU (Aquaporin OS=Encephalitozoon cuniculi GN=AQP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 53/179 (29.61%), Postives = 85/179 (47.49%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVA-CLLLKFVTNGQTTSAFALS---SGVGAWNAVVF--EIVMTFGLVYTVYATALDPKKGSLGT-----------------IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIV 775
            +++  H NPA+T  A +   + +LRGI Y +AQ +G  +A C LL     G   +   +    S  G  N  VF  E  +T  LV+  +ATA++P K    T                  AP+ IG  +G     G A  G + NP ++  P ++S +W++ W Y+ G  +GG + G++
Sbjct:   62 DVTVAHFNPAITLAAILTCKLGVLRGIGYIVAQYIGFILAVCALLPCSPVGYKETLNIIRPTPSPFGGDNLNVFFTEFFLTAILVHVAFATAVNPYKPKTDTEGKFVDPDEEEPVDRRITAPLCIGLTLGFLAFLGLASSGGAFNPGLTLAPVIMSNTWNHFWAYFAGQYLGGFVGGLL 240          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 781
            +ISG H+NPAVT G + GG       + Y +AQ++G  +A  +L  + +GQ     T+S FA +        G    +A+V EIVM   +++ +       ++   G  APIAIG  +    L        S+NPA S G AL    W+    W++WV P++G  L  + Y+
Sbjct:   55 HISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEIVM--AMMFLLVILGATDQRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYK 223          
The following BLAST results are available for this feature:
BLAST of CK933910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQPZ_PSEPK3.675e-1533.72Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ2_RHIME3.675e-1532.54Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQY1_YEAST1.824e-1429.63Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQY2_YEAST3.111e-1426.86Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ_VIBVU3.111e-1431.98Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQPZ1_AGRT53.111e-1428.26Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
NIP32_ORYSJ6.930e-1433.56Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_VIBPA6.930e-1431.87Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQP_ENCCU9.051e-1429.61Aquaporin OS=Encephalitozoon cuniculi GN=AQP PE=3 ... [more]
AQPZ_VIBVY9.051e-1431.98Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004543_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933910 ID=CK933910; Name=CK933910; organism=Citrus sinensis; type=EST; length=879bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGT
TCAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGT
CGCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCT
ATGTNAGTTTGCACGGATGTTGTATTTAA
back to top