CK933910

Overview
NameCK933910
Unique NameCK933910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:79..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G  +        A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA S GPAL    W+ +  W++W+ P+ G  +  + Y
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAY 226          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISGGH NPAVT G    G         Y +AQ++G+ VA   L  +  G        S FA ++G G  +        A++ EIV++ G V+ +       K+   G  API IG  +    L        S+NPA S GPAL    W+ +  W++W+ P+ G  +  + Y
Sbjct:   59 HISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFA-ANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGAT--DKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAY 226          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP_ENTBH (Aquaporin OS=Enterocytozoon bieneusi (strain H348) GN=AQP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 45/175 (25.71%), Postives = 77/175 (44.00%), Query Frame = 2
Query:  314 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGS------TVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDP------------KKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            S  H NPA+T  A   G + +L GI Y IAQL+G       TV C    ++   +  ++  +S  +   N    E +++F LV+  +   ++             K+      AP+ IG  +G          G + NP + +GPA++  ++D+  +Y +  L GG L   +  F
Sbjct:   64 SVAHFNPAITIAAICTGKLDILLGIGYVIAQLIGFILATLLTVVCFPYGYLKTMEFIASARISDDISTVNLFFTEFILSFILVFIAFEVGINAIREPGVTLFVGIKQIDRSKFAPLTIGITLGFLAFLASTTSGGAFNPGIVWGPAIMGGNFDDFVIYIISELSGGLLGAFIQVF 238          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALSSGVGAWN--------AVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            ISG H+NPAV+ G +VGG     + + Y +AQ+LG   A  +L  + +G+     +A   S+G G  +        A+V E+V+T   L+  + AT+    +G     APIAIG  +    L        S+NPA S   AL    W+    W++WV P++G  L  + Y
Sbjct:   56 ISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATSKRAPQG----FAPIAIGLTLTLIHLISIPVTNTSVNPARSTAVALYVGDWAVSQLWLFWVAPILGAVLGALAY 221          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 70/235 (29.79%), Postives = 97/235 (41.28%), Query Frame = 2
Query:  134 LRAALAEFISTLIFVFAGEGSGM-AFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-----------QTTSAFALSS--GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWS---WDNHWVYWVGPLIGGGLAGIVY 778
            ++  +AEFI T   V  G GS + A       G NT                          +ISGGH NPAV+FG ++G      +   Y  AQ+LG+ VA L +  V  G             T+ F   S  G G   A++ E V+TF  ++ +    +  K    G  AP AIG  +    L        S+NPA S G AL   +       W++W+ P+ G  LAG VY
Sbjct:    1 MKKYIAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTF--IFLIVILGVTDKTAPAG-FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVY 232          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 58/201 (28.86%), Postives = 85/201 (42.29%), Query Frame = 2
Query:  311 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLL--------------KFVTNGQTTSAFALSS----GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGP----ALVSWSWDNH-------WVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 826
            +SGGH+NPAV+F     G +   +   Y  AQLLG+ V    +              K +  G+  +AF  ++     V    A V ++V T  L+  V+A       G    + PI IG ++     + G   G +MNPA    P    AL  W ++         W+  VGP+IG  L G++Y  F   Q H   P  E
Sbjct:   78 VSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFDSRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPRLFTALAGWGFEVFTFGNNFWWIPVVGPMIGAVLGGLIYVLFI--QMHHSNPDPE 276          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 64/235 (27.23%), Postives = 100/235 (42.55%), Query Frame = 2
Query:  152 EFISTLIFVFAGEG--SGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL--LKFVTN-------GQTTSAFALSSGV-GAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIG-FIVGANILAGGAFDGASMNPAVSFGPALV----------SWSWDNHWVYWVGPLIGGGLAGIVYEFF 787
            EF+ TLI +  G G  +G+   K   N     S                      +S  H+NPAVT G  + G +     + Y +AQ  G+ +  +L  L+F  +       G   + F+    +    + ++ EI+ TF LV T++A  L   +  +GT    A+G  IVG  +  GG   G ++NPA   GP ++             W   W+  VGP+IG  LA +V+  F
Sbjct:    8 EFLGTLILILLGNGVVAGVVLPKTKSNS----SGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILATFSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAGIGT---FAVGTLIVGIGLSLGGT-TGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALAVLVFSLF 234          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 57/171 (33.33%), Postives = 82/171 (47.95%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALS-------SGVGAWNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 778
            +ISG H+NPAV+ G + GG     +   Y +AQ+LG+  A  +L  + +G         FA +        G     A+V E+VMT F L+  + AT    K+   G  AP+AIG  +    L        S+NPA S G AL    W+    W++W+ P+IG  L   VY
Sbjct:   55 HISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGAT---DKRAPAG-FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWAVQQLWLFWLAPIIGAVLGAKVY 221          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 62/235 (26.38%), Postives = 97/235 (41.28%), Query Frame = 2
Query:  146 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLL--LKFVTNGQTT-------SAFALSSGVGAWNA-VVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV----------SWSWDNHWVYWVGPLIGGGLAGIVYEFFF 790
            LAEF+ T++ +  G+G  +  N +        S                      ISG H+NPAVT G    G     +   Y  +Q+LG+ V  +L  L ++ + + T       + F     V  + A ++ EI+ T  L+  V     +     L    P+ +GF+V +  L+ G   G ++NPA  FGP L              W   WV  +GP+IGG L   +Y + F
Sbjct:    5 LAEFLGTMLLIILGDG--VVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLADGLN---PLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYNWLF 234          
BLAST of CK933910 vs. ExPASy Swiss-Prot
Match: AQP_NOSCE (Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 53/182 (29.12%), Postives = 76/182 (41.76%), Query Frame = 2
Query:  308 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALS------SGVGAWNAVVFEIVMTFGLVYTVYATA--------------LDPKKG---SLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 784
            +I+  H NPA+TF A     +    GI   I Q+ G  +A L    V  G+  +   ++        V        E  +T  LVY  +A                LDP +G        AP+AIGF +G   L G A  G + NP +   P +++ +WD  WVY +G   GG L G +  F
Sbjct:   62 DITVAHFNPAITFSAMCFRRLPFFGGIFIIIFQVAGFIIAGLASVAVLPGKYKNKLEIARPKRVADNVSRGRIFGTEFFLTAILVYVAFAVGVNPYTPPKDEHGDQLDPDEGLTEGRKITAPLAIGFTLGFCALLGIASSGGAFNPGIVLSPMILTGTWDFWWVYLLGQFSGGLLGGGLQRF 243          
The following BLAST results are available for this feature:
BLAST of CK933910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQPZ_BORPA3.803e-1231.40Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR3.803e-1231.40Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
AQP_ENTBH4.966e-1225.71Aquaporin OS=Enterocytozoon bieneusi (strain H348)... [more]
AQPZ_PSEAE6.486e-1232.35Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
AQPZ_SYNY31.106e-1129.79Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQP9_MOUSE1.106e-1128.86Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1[more]
GLPF_STRR61.445e-1127.23Glycerol uptake facilitator protein OS=Streptococc... [more]
AQPZ_CHRVO1.445e-1133.33Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
GLPF_THEMA1.887e-1126.38Probable glycerol uptake facilitator protein OS=Th... [more]
AQP_NOSCE1.887e-1129.12Aquaporin OS=Nosema ceranae (strain BRL01) GN=AQP ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933910 ID=CK933910; Name=CK933910; organism=Citrus sinensis; type=EST; length=879bp
GGGGAGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGT
TCAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTT
GGCCATCCCCGTGAGGCGACTCACCCAGATGCCCTAAGGGCAGCCCTAGC
AGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCA
TGGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTC
GTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGT
TGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCG
CCTTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATC
GCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTAC
CAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCAT
GGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACA
GTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGC
ACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGG
CGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTG
GTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCAT
CGGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGT
CGCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCT
ATGTNAGTTTGCACGGATGTTGTATTTAA
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