CK933923

Overview
NameCK933923
Unique NameCK933923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.581e-17
Identity = 66/212 (31.13%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCSRFHSI---QVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ + S  F+ G     +W +   P G + E    Y+S+++ L S   ++VRA F+ +LL+   +          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S   S    +VPE  +    G L +N   +D  F V G++F AHK VLAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKSEVRAKFKFSLLNDKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTSKVPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 63/212 (29.72%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +    G+ + S +F+ G     +W +   P G + E    Y+S+++ L S    +VRA F+ +LL+   +          +++ES       +G  WG+K++ RR  L  E +  L DD L + C V VV  +I+ S     ++++VPE  +    G L +N   +D +  V G++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-TGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKNEVRAKFKFSLLNSKNEET--------KAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGLLPDDKLTLYCEVSVVQDSINISGQSSSNNLKVPECRLAEDMGYLWENRRFTDCSLFVEGKEFKAHKSILAARSPVFSAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16
Identity = 62/212 (29.25%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ + S  F+ G     +W +   P G + E    Y+S+++ L S   ++VRA F+ +LL+   +          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L + +  +D +  V G++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKSEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNMLKVPECQLSDDLGNLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16
Identity = 62/212 (29.25%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  177 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGG---YQWAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDCS---RFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + V  S+ + I  +S  +   +G+ + S  F+ G     +W +   P G + E    Y+S+++ L S   ++VRA F+ +LL+   +          +++ES       +G  WG+K+F RR  L  E +  L DD L + C V VV  +++ S     + ++VPE  +    G L + +  +D +  V G++F AHK +LAARSP+F + F
Sbjct:   28 KVVKFSYMWTINNFSFCREE-MGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKD-YLSLYLLLVSCPKSEVRAKFKFSLLNAKREET--------KAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLKVPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMF 229          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12
Identity = 60/206 (29.13%), Postives = 101/206 (49.03%), Query Frame = 3
Query:  195 HKFVIQGYSLAKGMGIGKHIASDNFTVGGYQ---WAIYFYPDGKNPEDNSAYVSVFIALASE-GTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLETSD--YLKDDCLKINCTVGVVVSAIDC---SRFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            + + I  +S   G    K I S  F++   +   W +  YP+G + E++  Y+SV++ L S   + + A FE  +++  G+       +  R + +    L+Y     G+K+F  R +L +    +L +D   I C V +V +  D     R  +I+ P   +    G L DN+  +D    VAG +F AHK +LAARSP+FR+ F
Sbjct:   22 YNWTISNFSFCMGAH-QKSITSPVFSLEASKEVAWCLRLYPNGVD-EESKDYLSVYLELLSALESPILAKFEFWIINSQGE------KYQSRKISNVQCFLQYEHR--GFKKFLLRGLLLSHQNWFLPEDQFTICCKVSIVGTVFDMPGQKRTPAIKDPRHMLTDDLGELWDNSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMF 217          
BLAST of CK933923 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.105e-12
Identity = 58/206 (28.16%), Postives = 101/206 (49.03%), Query Frame = 3
Query:  195 HKFVIQGYSLAKGMGIGKHIASDNFTVGGYQ---WAIYFYPDGKNPEDNSAYVSVFIALAS-EGTDVRALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAIDC---SRFHSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKF 785
            +++ I  +S   G GI + I S  F++   +   W +  +P+G + E++  Y+SV++ L +     VRA FE  + +  G+      S    S +        R   WG+ +F  R  L    +  L  D L + C V +V + ++    +   +I+ P   +    G L +N+  +D +  VAG +F AHK++LAARSP+FR+ F
Sbjct:   22 YEWTISNFSFCMG-GIRRKIKSPVFSLEANEEVAWCLRVHPNGFD-EESKDYLSVYLVLVNCPKRQVRAKFEFWIKNSQGEKYQYTQSLNVHSFQ--------RKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIVGAILNMPGQNMIPAIKDPRHMLTDDLGKLWENSLFTDCSLLVAGHEFRAHKVILAARSPVFRAMF 217          
The following BLAST results are available for this feature:
BLAST of CK933923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
SPOPL_MOUSE9.581e-1731.13Speckle-type POZ protein-like OS=Mus musculus GN=S... [more]
SPOPL_XENLA2.788e-1629.72Speckle-type POZ protein-like OS=Xenopus laevis GN... [more]
SPOLB_DANRE3.641e-1629.25Speckle-type POZ protein-like B OS=Danio rerio GN=... [more]
SPOLA_DANRE6.210e-1629.25Speckle-type POZ protein-like A OS=Danio rerio GN=... [more]
TDPZ3_MOUSE1.096e-1229.13TD and POZ domain-containing protein 3 OS=Mus musc... [more]
TDPZ2_MOUSE7.105e-1228.16TD and POZ domain-containing protein 2 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_E08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933923 ID=CK933923; Name=CK933923; organism=Citrus sinensis; type=EST; length=790bp
GGGGGAAAAAGAGGGAAGGGGAAAAAAAAACCTAACTAAAATCTTCTGAA
CTTCCACTAATAAATTACTTGAAATTATTGAATAATCATAAAAATTCTTA
ACATTTCAATGAATCAGTAATGACGAATAGCAGCCCGAGCCCGCTGGTTT
CGCCAACGAGCTCCCGGTCAGTGACGGAAACCGTGAACGGATCGCACAAG
TTCGTGATTCAAGGGTACTCGTTAGCCAAAGGTATGGGAATCGGGAAGCA
CATTGCCAGCGACAATTTCACCGTGGGCGGCTACCAGTGGGCCATATATT
TTTATCCCGACGGTAAAAATCCGGAGGATAATTCAGCGTACGTGTCGGTT
TTTATTGCATTAGCGAGTGAAGGAACGGACGTAAGAGCATTGTTTGAGCT
GACGCTGTTGGATCAGAGTGGTAAAGGGAAGCACAAAGTGCATAGCCATT
TTGATCGATCGCTCGAGAGCGGTCCTTACACGCTCAAGTATCGTGGAAGC
ATGTGGGGATACAAGCGTTTTTTCAGACGAGCTATGCTTGAAACATCAGA
TTACCTCAAAGATGATTGCTTGAAAATCAATTGCACTGTTGGAGTTGTGG
TATCGGCTATAGACTGTTCACGGTTCCACTCAATTCAGGTCCCAGAGTCT
GATATAGGAGCACATTTTGGCATGCTACTAGACAATGCAGAAAGCTCTGA
CATCACTTTTGATGTAGCTGGGGAAAAATTTCCTGCTCATAAGTTGGTAT
TGGCTGCACGATCTCCAATATTTCGTTCTAAATTCTTTGA
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