CK933942

Overview
NameCK933942
Unique NameCK933942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13188 contig Csv1_Contig13188:1..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA_HUMAN (Alpha-soluble NSF attachment protein OS=Homo sapiens GN=NAPA PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 7.567e-44
Identity = 84/186 (45.16%), Postives = 131/186 (70.43%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 783
            GLFG  SK E+A +++ +AAN FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   30 GLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAALLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAB_BOVIN (Beta-soluble NSF attachment protein OS=Bos taurus GN=NAPB PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.686e-43
Identity = 82/183 (44.81%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 774
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEI+E+I   +++N LLKY  K +   A +C
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIFEQIGANTMDNPLLKYSAKDYFFKAALC 212          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAB_RAT (Beta-soluble NSF attachment protein OS=Rattus norvegicus GN=Napb PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.093e-42
Identity = 82/183 (44.81%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  235 GLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 774
            GLFG  ++ E+A +++ +AAN FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE + SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   30 GLFGGNTRIEEACEMYTRAANMFKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEE-SNSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 211          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SNAA1_ARATH (Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana GN=ASNAP1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.152e-42
Identity = 100/199 (50.25%), Postives = 119/199 (59.80%), Query Frame = 1
Query:  223 LNGWGLFGSKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            LN    F +K EDAADL +KA +S+KLAKSWD+AG  Y+KLA+CHLK  S    A  Y+    C                                  EIAE YES+   EQ I ++E AA+ FQ EEVTTSANQC  KVAQYA++LEQ  + ++     AR SLNN LLKYGVKGHLL AG+C LCK DVV+ITNALE
Sbjct:  107 LNRRRRFDTKYEDAADLLEKARDSYKLAKSWDQAGIAYLKLADCHLKANS---LANTYMIMDECMDH-------------------------------EIAEYYESDEMFEQAIAYYETAAEFFQIEEVTTSANQCNLKVAQYASQLEQQSRFMKTQ---ARHSLNNKLLKYGVKGHLLTAGMCHLCKADVVSITNALE 268          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SEC17_COPC7 (Vesicular-fusion protein SEC17 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=SEC17 PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.646e-30
Identity = 73/192 (38.02%), Postives = 110/192 (57.29%), Query Frame = 1
Query:  229 GW-GLFGSKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVV 798
            GW     SK E+A DL+ +AAN+FKL K + +AG  + + A C  K +   +A  A+ +AA  YK+   + AI  L+Q +      GR   AA   KEIA++Y  E H++ +    F +A D +  E+ T +ANQC +  A   AELEQ+ ++I +YE +A  SL +NL KY VK + L + +C +  GD+V
Sbjct:   23 GWFSSANSKWEEAGDLYQQAANAFKLEKQFKEAGDAFAREAECREKCKESLDAGNAWWNAAKAYKRGYPDLAIQALQQTIQHLVAGGRFRQAADREKEIAQIYLQETHDLSRACESFLRAGDWYAEEDATATANQCYKDAADLYAELEQFPQAITLYERVADHSLTSNLTKYSVKEYWLKSLLCTVALGDIV 214          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SEC17_SCHPO (Probable vesicular-fusion protein sec17 homolog OS=Schizosaccharomyces pombe GN=sec17 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.000e-28
Identity = 68/200 (34.00%), Postives = 112/200 (56.00%), Query Frame = 1
Query:  229 GWGLFG--SKCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            G+ LFG  +K ++A++LF  AAN ++L K    AG  + K A   LK + K +AA  YV+A   Y++   +EA   L+ A+ +F   G    AA Y  ++ +++E E  + +  +  +E A + + +++    AN+   K A  A    +Y  +I  +E++AR S+ NNLLK+ VK +LL AG+C +  GD +A   ALE
Sbjct:   21 GFALFGGGNKYDEASELFLDAANGYRLQKQGSAAGYAFEKAAEMQLKTDDKDDAASTYVEAFKSYRREKPSEAARVLQIAIELFTRRGNFRRAANYKMDLGDIFEQELQDTKAALGAYEDAGEWYSSDQADALANKAYLKAADLAGLCGEYSLAIRKFEQVARASVQNNLLKWSVKDYLLKAGLCYMANGDEIATRRALE 220          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SEC17_PICPG (Vesicular-fusion protein SEC17 OS=Pichia pastoris (strain GS115) GN=SEC17 PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 65/191 (34.03%), Postives = 114/191 (59.69%), Query Frame = 1
Query:  256 EDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAA--ELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            E+AADL+ +AAN +++ +  +KAG  + K A+  +K +SK EAA + ++A  CYK  + ++A  CL +AV  F   G+    A +  E+AELYE++  + +  I+ +E+A + ++ +     AN+C  K A  +   E++ + K+ E YE IA++SLNN+L K+ +K +   A +C+L   D  + +  LE
Sbjct:   34 EEAADLYTQAANLYRIQRKSNKAGHVFEKAADAQIKADSKDEAANSLIEAYKCYKLDAPSDAARCLNKAVEFFALKGQFRRGANFKAELAELYETKMADPKHAILAYEEAGEWYRGDSAEALANKCYVKAADLSCSDEVQDFLKAAESYERIAKESLNNSLAKWSLKDYFFKAILCRLALNDYPSASALLE 224          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SEC17_NEUCR (Probable vesicular-fusion protein sec17 homolog OS=Neurospora crassa GN=B1D1.150 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 71/195 (36.41%), Postives = 114/195 (58.46%), Query Frame = 1
Query:  229 GWGLFGSK---CEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHL-KLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVV 798
            GWGLFG+K    ++AAD + +AAN+F+L KS  +AG  + + A     KL+  ++AA A +DA   Y+K + + A+ C+E A+  +   G    AA + +  AE+YE+E  N  + I  +  AA+ ++N+     AN+   KVA  +A    +  +IE +E++A  SL NNL++Y VK + L AG+C L   D+V
Sbjct:   22 GWGLFGNKEDKYQNAADQYIQAANAFRLQKSNTEAGKCFEEAAKIFTEKLKEPNDAANAMLDAFKVYRKDAPDNAVRCVEVAIKQYTMAGNFRRAASHKENQAEVYENELQNKPEAIKAYTTAAEWYENDGAVALANKLWLKVADLSALAGDFFAAIEKFEKVAEASLGNNLMRYSVKEYFLKAGLCSLATKDMV 216          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: SEC17_YEAST (Alpha-soluble NSF attachment protein OS=Saccharomyces cerevisiae GN=SEC17 PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 1.814e-21
Identity = 58/192 (30.21%), Postives = 104/192 (54.17%), Query Frame = 1
Query:  250 KCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSN-EAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALE 819
            K E+AADL  +AA  ++L K  + AG +++K A+   K  ++ EA   YV+A  C+K   ++  A+  LE A+ +F   G+    A +  E+ E+ E++ H+  + I  +E A + +  ++    +N+C  K A   A   QY ++ +IY ++ + S+ N L ++ +K + L  G+CQL   D VA    L+
Sbjct:   32 KFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQ 223          
BLAST of CK933942 vs. ExPASy Swiss-Prot
Match: V011_FOWPV (Soluble NSF attachment protein homolog FPV011 OS=Fowlpox virus GN=FPV011 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.834e-20
Identity = 57/186 (30.65%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  238 LFGS--KCEDAADLFDKAANSFKLAKSWDKAGATYVKLANCHL-KLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 783
            LFG   + E+AA +   AAN F   + W+ AG  + K  +  L K ++   AA ++VDAA+ +KK  S EAI+CL +A+ ++  +G+    AR +  IA +YE++   +++ I  +E A+  +  E     ++ C   +A+ + + E + ++ +I+E++    +N  L KY  +  LL A +C LC
Sbjct:   15 LFGPPIEIEEAAGMVSHAANLFASVQLWECAGKAFFKSGDMLLQKNKNSIAAASSFVDAANAFKKIDSYEAINCLSKAIEVYTCLGKFYTVARCHMNIAAIYENDILELDKAIFHYENASGYYGGEGYNKLSDDCMLLIARLSIQKEDFDRAGKIFEQVGYNRMNTMLSKYESRHQLLYAIMCYLC 200          
The following BLAST results are available for this feature:
BLAST of CK933942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAA_HUMAN7.567e-4445.16Alpha-soluble NSF attachment protein OS=Homo sapie... [more]
SNAB_BOVIN1.686e-4344.81Beta-soluble NSF attachment protein OS=Bos taurus ... [more]
SNAB_RAT1.093e-4244.81Beta-soluble NSF attachment protein OS=Rattus norv... [more]
SNAA1_ARATH4.152e-4250.25Alpha-soluble NSF attachment protein 1 OS=Arabidop... [more]
SEC17_COPC73.646e-3038.02Vesicular-fusion protein SEC17 OS=Coprinopsis cine... [more]
SEC17_SCHPO2.000e-2834.00Probable vesicular-fusion protein sec17 homolog OS... [more]
SEC17_PICPG9.928e-2834.03Vesicular-fusion protein SEC17 OS=Pichia pastoris ... [more]
SEC17_NEUCR9.928e-2836.41Probable vesicular-fusion protein sec17 homolog OS... [more]
SEC17_YEAST1.814e-2130.21Alpha-soluble NSF attachment protein OS=Saccharomy... [more]
V011_FOWPV5.834e-2030.65Soluble NSF attachment protein homolog FPV011 OS=F... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004543_C12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933942 ID=CK933942; Name=CK933942; organism=Citrus sinensis; type=EST; length=821bp
GGGGGCACTCTTGAGAATTCTTTTCCTCTTTACTTTTCCTTTCTTAGCAA
ATACCTAACCTCTGACACTACCAATTCCCCTTTTTTTCCCGATTGTTTTA
TTTTCTTCTAGTTCTTGCTCCGATTAATTCATTTCTCCGCCTATAATAAA
ATAAAATACTAAAAGAAAATGGGCGATCAGATTGCTCGAGCCGAGGAATT
CGAGAAAAAAGCGGAGAAAAAGCTTAATGGTTGGGGTTTATTCGGCTCCA
AGTGCGAAGACGCCGCCGATCTCTTCGATAAAGCCGCCAATTCCTTCAAG
CTCGCCAAATCATGGGATAAAGCTGGAGCAACTTATGTTAAGTTGGCAAA
CTGTCATTTAAAGTTGGAAAGCAAACATGAAGCTGCTCAAGCTTATGTTG
ATGCTGCCCACTGCTATAAGAAAACATCTTCAAATGAGGCCATATCTTGC
TTAGAACAGGCTGTAAATATGTTTTGTGACATTGGAAGGCTCAGTATGGC
TGCAAGATATTATAAGGAAATTGCTGAGCTGTATGAATCTGAGCACAACA
TTGAACAGACTATTGTTTTCTTTGAGAAGGCAGCTGATATGTTCCAAAAT
GAAGAAGTAACAACTTCTGCTAACCAGTGCAAGCAGAAAGTTGCACAATA
TGCTGCTGAATTGGAACAATATCACAAGTCAATTGAGATTTATGAAGAGA
TTGCTAGGCAGTCTCTCAACAACAACTTGTTGAAATATGGAGTGAAAGGA
CATCTTCTTAATGCTGGCATATGCCAACTTTGCAAGGGTGATGTTGTTGC
AATTACCAACGCATTGGAGCG
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